RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CDC23Q9UJX2 597 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 PCDHA6Q9UN73 950 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CTNND2Q9UQB3 1225 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 PCDHA8Q9Y5H6 950 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 SIPA1L1O43166 1804 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ATP8B3O60423 1300 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 KDM3AQ9Y4C1 1321 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 COL11A2P13942 1736 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 BRWD3Q6RI45 1802 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 IGKV6D-41A0A0C4DH26 115 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 CTAGE9A4FU28 777 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 WNT7AO00755 349 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 CYTH3O43739 400 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 KLRC4O43908 158 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 URI1O94763 535 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 SRGNP10124 158 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 BTDP43251 543 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 CDK8P49336 464 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 NAPAP54920 295 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 RHBDL3P58872 404 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 GNG11P61952 73 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 KRT83P78385 493 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 LRRC63Q05C16 580 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 ITIH3Q06033 890 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 PPP2R3AQ06190 1150 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 GABPAQ06546 454 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 TMEM266Q2M3C6 531 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 ARHGAP29Q52LW3 1261 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 FAM47AQ5JRC9 791 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 HYIQ5T013 277 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 SOGA3Q5TF21 947 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 ISM2Q6H9L7 571 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 PPP4R3AQ6IN85 833 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 PRR5LQ6MZQ0 368 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 TTI2Q6NXR4 508 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 SRGAP1Q7Z6B7 1085 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 GRAMD1CQ8IYS0 662 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 REXO1Q8N1G1 1221 aaKnown RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 MSANTD4Q8NCY6 345 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 OR8K1Q8NGG5 319 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 SH3RF3Q8TEJ3 882 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 TSC1Q92574 1164 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 CALML4Q96GE6 196 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 EYA3Q99504 573 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 TSGA10Q9BZW7 698 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 TRIM9Q9C026 710 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 MAGEC2Q9UBF1 373 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 SRP68Q9UHB9 627 aaKnown RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 RAB21Q9UL25 225 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 CAPN11Q9UMQ6 739 aa7.69□□□□□ -1.18
CDHR3-204ENST00000466351 V9GYY5 206 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-204ENST00000466351 A0A0G2JS52 829 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 PSMD14O00487 310 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 NPHP1O15259 732 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 NMT2O60551 498 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ERLIN1O75477 346 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 UFL1O94874 794 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CLSTN1O94985 981 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 IPO7O95373 1038 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CYP2D6P10635 497 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ATP2B1P20020 1258 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CYLC1P35663 651 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 PRCPP42785 496 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CLCN6P51797 869 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ADKP55263 362 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 RBL2Q08999 1139 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TRAF1Q13077 416 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 IL17AQ16552 155 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ERCC6LQ2NKX8 1250 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TSR1Q2NL82 804 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 HHIPL2Q6UWX4 724 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 BICDL1Q6ZP65 573 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TOGARAM2Q6ZUX3 1019 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 HEATR3Q7Z4Q2 680 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CCDC84Q86UT8 332 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 CABP7Q86V35 215 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TXNRD3Q86VQ6 643 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 SP8Q8IXZ3 490 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 GUF1Q8N442 669 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 PKNOX2Q96KN3 472 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 NAPGQ99747 312 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 UBXN6Q9BZV1 441 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TTYH3Q9C0H2 523 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 NT5C3AQ9H0P0 336 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ARFGAP3Q9NP61 516 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 RIC8AQ9NPQ8 531 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 EXOC1Q9NV70 894 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 TFCP2L1Q9NZI6 479 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 USP21Q9UK80 565 aa7.68□□□□□ -1.18
CDHR3-204ENST00000466351 LUC7L2Q9Y383 392 aaKnown RBP7.68□□□□□ -1.18
CDHR3-204ENST00000466351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms