RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CENPFP49454 3210 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 UNC80Q8N2C7 3258 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 MYO3BQ8WXR4 1341 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 IRS2Q9Y4H2 1338 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 DHX15O43143 795 aaKnown RBP7.68□□□□□ -1.18
NCL-208ENST00000466274 ADAM11O75078 769 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 UFL1O94874 794 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 SGPL1O95470 568 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 IGLV1-40P01703 118 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 ACPPP15309 386 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 PTPRAP18433 802 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 CAP1Q01518 475 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 PDE12Q6L8Q7 609 aaKnown RBP7.68□□□□□ -1.18
NCL-208ENST00000466274 FAM117BQ6P1L5 589 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 KLHL23Q8NBE8 558 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 PNISRQ8TF01 805 aaKnown RBP7.68□□□□□ -1.18
NCL-208ENST00000466274 FOXD4L4Q8WXT5 416 aaPredicted RBP7.68□□□□□ -1.18
NCL-208ENST00000466274 CLMNQ96JQ2 1002 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 DEFB129Q9H1M3 183 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 RIPOR2Q9Y4F9 1068 aa7.68□□□□□ -1.18
NCL-208ENST00000466274 U2SURPO15042 1029 aaKnown RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 TLR2O60603 784 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 CD97P48960 835 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 RPS8P62241 208 aaKnown RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 MAP3K12Q12852 859 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 TAF7Q15545 349 aaPredicted RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 NECAB2Q7Z6G3 386 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 C1orf127Q8N9H9 656 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 MAFAQ8NHW3 353 aaPredicted RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 UBASH3BQ8TF42 649 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 EDEM1Q92611 657 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 CEP41Q9BYV8 373 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 ADAM19Q9H013 955 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 ZCCHC17Q9NP64 241 aaKnown RBP7.67□□□□□ -1.18
NCL-208ENST00000466274 SRRDQ9UH36 339 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 FAM205AQ6ZU69 1335 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
NCL-208ENST00000466274 CCL15-CCL14A0A0B4J2E2 113 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 A6NHS1 94 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 HTATSF1O43719 755 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 MYO1BO43795 1136 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 TGFB1P01137 390 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 MAGEA10P43363 369 aaPredicted RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 PSMC4P43686 418 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 DNM1Q05193 864 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 SF3B3Q15393 1217 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 CCL15Q16663 113 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 C7orf61Q8IZ16 206 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 CELF1Q92879 486 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 OPTNQ96CV9 577 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 FAM46AQ96IP4 442 aaKnown RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 GUCD1Q96NT3 240 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 ARHGAP39Q9C0H5 1083 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 SALL4Q9UJQ4 1053 aa7.66□□□□□ -1.18
NCL-208ENST00000466274 ZMYND8Q9ULU4 1186 aaPredicted RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 COL1A1P02452 1464 aaPredicted RBP7.66□□□□□ -1.18
NCL-208ENST00000466274 SASH1O94885 1247 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 CES1P23141 567 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 MCM10Q7L590 875 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 NLRP10Q86W26 655 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 BRI3BPQ8WY22 251 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 CCDC97Q96F63 343 aaPredicted RBP7.65□□□□□ -1.18
NCL-208ENST00000466274 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
NCL-208ENST00000466274 MYPNQ86TC9 1320 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 SYNGAP1Q96PV0 1343 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 HMX2A2RU54 273 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 GSC2O15499 205 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 CETPP11597 493 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 DLGAP5Q15398 846 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 C8orf34Q49A92 452 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 STRIP1Q5VSL9 837 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 XKR5Q6UX68 686 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 FAM161BQ96MY7 647 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 KRTAP4-12Q9BQ66 201 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 DZANK1Q9NVP4 752 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 FZD1Q9UP38 647 aa7.64□□□□□ -1.19
NCL-208ENST00000466274 VCANP13611 3396 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 DUOX1Q9NRD9 1551 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 H3BRJ5 948 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 COBLO75128 1261 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 PDGFAP04085 211 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 FCGRTP55899 365 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 NLRP12P59046 1061 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 NFIAQ12857 509 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 DACT2Q5SW24 774 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 HGSNATQ68CP4 663 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 KRTAP1-3Q8IUG1 177 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 FAM43AQ8N2R8 423 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 SLC7A3Q8WY07 619 aa7.63□□□□□ -1.19
NCL-208ENST00000466274 PAWRQ96IZ0 340 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms