RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 NFXL1Q6ZNB6 911 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 TCEANC2Q96MN5 208 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 MAP3K13O43283 966 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 ICAM1P05362 532 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 RXRAP19793 462 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 OLFML2BQ68BL8 750 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 HOMER1Q86YM7 354 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 TRPV1Q8NER1 839 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 PIBF1Q8WXW3 757 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 ANKS1AQ92625 1134 aa11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 A1CFQ9NQ94 594 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 ZHX1Q9UKY1 873 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 DDX49Q9Y6V7 483 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-205ENST00000466260 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 NFIBO00712 420 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 CYBAP13498 195 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 CALML3P27482 149 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 MCM5P33992 734 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 ADCK5Q3MIX3 580 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 PAWRQ96IZ0 340 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 TINF2Q9BSI4 451 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 DDX20Q9UHI6 824 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
RTFDC1-205ENST00000466260 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 SH2B2O14492 632 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 CPA1P15085 419 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 GRM4Q14833 912 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
RTFDC1-205ENST00000466260 DNAJC25-GNG10A0A024R161 153 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 STK25O00506 426 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 REC8O95072 547 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 BAATQ14032 418 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 GJC2Q5T442 439 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 POTEHQ6S545 545 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 ARMCX2Q7L311 632 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 DPF3Q92784 378 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 FGD4Q96M96 766 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 CYP39A1Q9NYL5 469 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 OGDHLQ9ULD0 1010 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 DIS3Q9Y2L1 958 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 PFASO15067 1338 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
RTFDC1-205ENST00000466260 SEPT4O43236 478 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 SNAI1O95863 264 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 FGD1P98174 961 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 LHX8Q68G74 356 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 FBXO11Q86XK2 927 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 CMTR1Q8N1G2 835 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 JAKMIP1Q96N16 626 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 PIGSQ96S52 555 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 C11orf49Q9H6J7 331 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 SNX14Q9Y5W7 946 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 KIAA1217Q5T5P2 1943 aa11.32□□□□□ -0.6
RTFDC1-205ENST00000466260 PDE4DIPQ5VU43 2346 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 TNRC18O15417 2968 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 MSCO60682 206 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 DDAH1O94760 285 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms