RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 CHMLP26374 656 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 ACLYP53396 1101 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 PTH1RQ03431 593 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 KCNA10Q16322 511 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 TDHQ8IZJ6 230 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 ZSCAN10Q96SZ4 725 aaPredicted RBP16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
CACNA1C-224ENST00000465934 TLE2Q04725 743 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 BAATQ14032 418 aaPredicted RBP16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 EEPD1Q7L9B9 569 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 IQCA1Q86XH1 822 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 PDLIM7Q9NR12 457 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 TAF6LQ9Y6J9 622 aa16.49■□□□□ 0.23
CACNA1C-224ENST00000465934 TNKSO95271 1327 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 TRIM43BA6NCK2 446 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 CTAGE5O15320 804 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 C6orf222P0C671 652 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 C1orf53Q5VUE5 145 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 CYB5R4Q7L1T6 521 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 FBXO16Q8IX29 292 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 TRIM43Q96BQ3 446 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 KAT14Q9H8E8 782 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 PDGFCQ9NRA1 345 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 PRKAG2Q9UGJ0 569 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 SMCHD1A6NHR9 2005 aa16.48■□□□□ 0.23
CACNA1C-224ENST00000465934 RAD50Q92878 1312 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 ASB14A6NK59 587 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 PQBP1O60828 265 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 ITGB8P26012 769 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 GJA9P57773 515 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 TSEN34Q9BSV6 310 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 KRT23Q9C075 422 aa16.47■□□□□ 0.23
CACNA1C-224ENST00000465934 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 CYP21A2P08686 494 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 SMPD1P17405 629 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 CALML3P27482 149 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 CST5P28325 142 aaPredicted RBP16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 NT5C2P49902 561 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 BEX3Q00994 111 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 USH1GQ495M9 461 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 TAPT1Q6NXT6 567 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 BADQ92934 168 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 CNNM2Q9H8M5 875 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 STARD7Q9NQZ5 370 aa16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-224ENST00000465934 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 SGSM2O43147 1006 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 ASGR1P07306 291 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 ALDH5A1P51649 535 aaPredicted RBP16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 SEC23AQ15436 765 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 CDC37Q16543 378 aaPredicted RBP16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 LRIT3Q3SXY7 679 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 CCDC178Q5BJE1 867 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 MORC4Q8TE76 937 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
CACNA1C-224ENST00000465934 CLTBP09497 229 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 RNF207Q6ZRF8 634 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 TLK2Q86UE8 772 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 SPC25Q9HBM1 224 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 SENP2Q9HC62 589 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 MCM3APO60318 1980 aa16.44■□□□□ 0.22
CACNA1C-224ENST00000465934 LRRC37A2A6NM11 1700 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 NKX3-2P78367 333 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 FAAP100Q0VG06 881 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 C9orf50Q5SZB4 431 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 Q7L0L9 218 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 ANKRD33Q7Z3H0 272 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 PCSK9Q8NBP7 692 aaKnown RBP16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 VAT1LQ9HCJ6 419 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
CACNA1C-224ENST00000465934 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms