RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 CNTN2Q02246 1040 aa30.18■■■□□ 2.42
SMC4-206ENST00000465903 QRICH1Q2TAL8 776 aa30.18■■■□□ 2.42
SMC4-206ENST00000465903 SGMS1Q86VZ5 419 aa30.18■■■□□ 2.42
SMC4-206ENST00000465903 RIOX1Q9H6W3 641 aa30.18■■■□□ 2.42
SMC4-206ENST00000465903 CYP39A1Q9NYL5 469 aa30.18■■■□□ 2.42
SMC4-206ENST00000465903 CCDC69A6NI79 296 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 NFIBO00712 420 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 CYTH3O43739 400 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 DHX16O60231 1041 aaKnown RBP30.17■■■□□ 2.42
SMC4-206ENST00000465903 CPA1P15085 419 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 LHX8Q68G74 356 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 MAMDC4Q6UXC1 1216 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 NFXL1Q6ZNB6 911 aa30.17■■■□□ 2.42
SMC4-206ENST00000465903 ZNF467Q7Z7K2 595 aaPredicted RBP30.17■■■□□ 2.42
SMC4-206ENST00000465903 SOWAHBA6NEL2 793 aa30.16■■■□□ 2.42
SMC4-206ENST00000465903 TFRCP02786 760 aaKnown RBP30.16■■■□□ 2.42
SMC4-206ENST00000465903 USH1GQ495M9 461 aa30.16■■■□□ 2.42
SMC4-206ENST00000465903 NSMFQ6X4W1 530 aa30.16■■■□□ 2.42
SMC4-206ENST00000465903 JAKMIP1Q96N16 626 aaKnown RBP30.16■■■□□ 2.42
SMC4-206ENST00000465903 PFASO15067 1338 aa30.16■■■□□ 2.42
SMC4-206ENST00000465903 MKI67P46013 3256 aaKnown RBP30.16■■■□□ 2.42
SMC4-206ENST00000465903 POTEB2H3BUK9 544 aa30.15■■■□□ 2.42
SMC4-206ENST00000465903 HMGB1P09429 215 aaKnown RBP30.15■■■□□ 2.42
SMC4-206ENST00000465903 CAPN2P17655 700 aa30.15■■■□□ 2.42
SMC4-206ENST00000465903 UBE2Q1Q7Z7E8 422 aa30.15■■■□□ 2.42
SMC4-206ENST00000465903 MSL3Q8N5Y2 521 aaKnown RBP30.15■■■□□ 2.42
SMC4-206ENST00000465903 PDE4DIPQ5VU43 2346 aa30.14■■■□□ 2.42
SMC4-206ENST00000465903 SNAI1O95863 264 aaPredicted RBP30.14■■■□□ 2.42
SMC4-206ENST00000465903 RXRAP19793 462 aa30.14■■■□□ 2.42
SMC4-206ENST00000465903 BAATQ14032 418 aaPredicted RBP30.14■■■□□ 2.42
SMC4-206ENST00000465903 PURBQ96QR8 312 aaKnown RBP30.14■■■□□ 2.42
SMC4-206ENST00000465903 OGDHLQ9ULD0 1010 aa30.14■■■□□ 2.42
SMC4-206ENST00000465903 ASTN1O14525 1302 aa30.14■■■□□ 2.42
SMC4-206ENST00000465903 PPP1R11O60927 126 aaPredicted RBP30.13■■■□□ 2.41
SMC4-206ENST00000465903 CNGA1P29973 690 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 FBXO11Q86XK2 927 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 RAB11FIP4Q86YS3 637 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 PIGSQ96S52 555 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 DDX20Q9UHI6 824 aaKnown RBP30.13■■■□□ 2.41
SMC4-206ENST00000465903 BRPF3Q9ULD4 1205 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 SLC12A7Q9Y666 1083 aa30.13■■■□□ 2.41
SMC4-206ENST00000465903 ZBTB5O15062 677 aa30.12■■■□□ 2.41
SMC4-206ENST00000465903 ZNF865P0CJ78 1059 aaPredicted RBP30.12■■■□□ 2.41
SMC4-206ENST00000465903 CTCFLQ8NI51 663 aaPredicted RBP30.12■■■□□ 2.41
SMC4-206ENST00000465903 TBC1D5Q92609 795 aa30.12■■■□□ 2.41
SMC4-206ENST00000465903 NRBP1Q9UHY1 535 aa30.12■■■□□ 2.41
SMC4-206ENST00000465903 ABCB11O95342 1321 aa30.12■■■□□ 2.41
SMC4-206ENST00000465903 SYNGAP1Q96PV0 1343 aa30.12■■■□□ 2.41
SMC4-206ENST00000465903 CALM1P0DP23 149 aa30.11■■■□□ 2.41
SMC4-206ENST00000465903 CALM2P0DP24 149 aa30.11■■■□□ 2.41
SMC4-206ENST00000465903 CALM3P0DP25 149 aa30.11■■■□□ 2.41
SMC4-206ENST00000465903 MNX1P50219 401 aaPredicted RBP30.11■■■□□ 2.41
SMC4-206ENST00000465903 BLOC1S2Q6QNY1 142 aa30.11■■■□□ 2.41
SMC4-206ENST00000465903 KIF5BP33176 963 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 APOA5Q6Q788 366 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 SLC30A10Q6XR72 485 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 RNF207Q6ZRF8 634 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 CCDC144CPQ8IYA2 1237 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 FANCBQ8NB91 859 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 RGS22Q8NE09 1264 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 AMNQ9BXJ7 453 aa30.1■■■□□ 2.41
SMC4-206ENST00000465903 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.1■■■□□ 2.41
SMC4-206ENST00000465903 PTPDC1A2A3K4 754 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 SEPT4O43236 478 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 PLEKHA8P1O95397 391 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 RPS6KB1P23443 525 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 SMARCA1P28370 1054 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 RPS6P62753 249 aaKnown RBP30.09■■■□□ 2.41
SMC4-206ENST00000465903 Q6ZUG5 572 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 ARMCX2Q7L311 632 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 HOMER1Q86YM7 354 aa30.09■■■□□ 2.41
SMC4-206ENST00000465903 SRBD1Q8N5C6 995 aaKnown RBP30.09■■■□□ 2.41
SMC4-206ENST00000465903 FARP2O94887 1054 aaPredicted RBP30.08■■■□□ 2.41
SMC4-206ENST00000465903 CASTP20810 708 aaKnown RBP30.08■■■□□ 2.41
SMC4-206ENST00000465903 PSMA5P28066 241 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 ANO1Q5XXA6 986 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 ANKLE1Q8NAG6 615 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 SPZ1Q9BXG8 430 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 KATNBL1Q9H079 304 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 MRPL11Q9Y3B7 192 aaKnown RBP30.08■■■□□ 2.41
SMC4-206ENST00000465903 DDX49Q9Y6V7 483 aaKnown RBP30.08■■■□□ 2.41
SMC4-206ENST00000465903 LRRC37A2A6NM11 1700 aa30.08■■■□□ 2.41
SMC4-206ENST00000465903 PNMA6FA0A0J9YX94 578 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 OPLAHO14841 1288 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 MSCO60682 206 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 CALML3P27482 149 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 GNAQP50148 359 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 MICU3Q86XE3 530 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 CMTR1Q8N1G2 835 aaKnown RBP30.07■■■□□ 2.4
SMC4-206ENST00000465903 FBXL16Q8N461 479 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 LZTS2Q9BRK4 669 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 AGXT2Q9BYV1 514 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 ZSWIM6Q9HCJ5 1215 aa30.07■■■□□ 2.4
SMC4-206ENST00000465903 SEC24BO95487 1268 aa30.06■■■□□ 2.4
SMC4-206ENST00000465903 SYNE3Q6ZMZ3 975 aa30.06■■■□□ 2.4
SMC4-206ENST00000465903 DIS3LQ8TF46 1054 aaKnown RBP30.06■■■□□ 2.4
SMC4-206ENST00000465903 MAF1Q9H063 256 aa30.06■■■□□ 2.4
SMC4-206ENST00000465903 ABHD16BQ9H3Z7 469 aa30.06■■■□□ 2.4
SMC4-206ENST00000465903 CNPY2Q9Y2B0 182 aa30.06■■■□□ 2.4
SMC4-206ENST00000465903 KLF18A0A0U1RQI7 1052 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms