RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 RESTQ13127 1097 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 GNL2Q13823 731 aaKnown RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 PLS1Q14651 629 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 TMEM132BQ14DG7 1078 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 RASGRP4Q8TDF6 673 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 PARK7Q99497 189 aaKnown RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 PAGR1Q9BTK6 254 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 hCG_1984214I3L0E3 225 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 KRT2P35908 639 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 SAFBQ15424 915 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 NOM1Q5C9Z4 860 aaKnown RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 LBX2Q6XYB7 198 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 ZNF713Q8N859 430 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 CCDC12Q8WUD4 166 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 TNPO1Q92973 898 aaKnown RBP19.78■□□□□ 0.76
PTPRU-206ENST00000465525 BTBD7Q9P203 1132 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 TCHHQ07283 1943 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 ALAS1P13196 640 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 ADCY7P51828 1080 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 UBE2SQ16763 222 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 BLIDQ8IZY5 108 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 SMCR8Q8TEV9 937 aaPredicted RBP19.77■□□□□ 0.76
PTPRU-206ENST00000465525 GTF3C2Q8WUA4 911 aaPredicted RBP19.77■□□□□ 0.76
PTPRU-206ENST00000465525 ZMYND12Q9H0C1 365 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 PCDHA4Q9UN74 947 aa19.77■□□□□ 0.76
PTPRU-206ENST00000465525 RBBP6Q7Z6E9 1792 aaKnown RBP19.77■□□□□ 0.75
PTPRU-206ENST00000465525 FAM205CA6NFA0 338 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 TAF1CQ15572 869 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-206ENST00000465525 SNRNP48Q6IEG0 339 aaKnown RBP19.76■□□□□ 0.75
PTPRU-206ENST00000465525 PPP1R18Q6NYC8 613 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 DNAJC5GQ8N7S2 189 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 MB21D1Q8N884 522 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 C6orf50Q9HD87 102 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 TMEM260Q9NX78 707 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 ZNF214Q9UL59 606 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-206ENST00000465525 RIPK3Q9Y572 518 aa19.76■□□□□ 0.75
PTPRU-206ENST00000465525 OPLAHO14841 1288 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 CALML3P27482 149 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 GCLCP48506 637 aaPredicted RBP19.75■□□□□ 0.75
PTPRU-206ENST00000465525 PSTPIP2Q9H939 334 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 ZFYVE28Q9HCC9 887 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 TXNRD2Q9NNW7 524 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 BIN2Q9UBW5 565 aaPredicted RBP19.75■□□□□ 0.75
PTPRU-206ENST00000465525 CNMDO75829 334 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 PDIA4P13667 645 aaKnown RBP19.75■□□□□ 0.75
PTPRU-206ENST00000465525 MUM1L1Q5H9M0 696 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 EARS2Q5JPH6 523 aaKnown RBP19.75■□□□□ 0.75
PTPRU-206ENST00000465525 USP17L6PQ6QN14 398 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 TBC1D5Q92609 795 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 BRMS1Q9HCU9 246 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 RIC8AQ9NPQ8 531 aa19.75■□□□□ 0.75
PTPRU-206ENST00000465525 ABCB11O95342 1321 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 ESYT2A0FGR8 921 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 CA12O43570 354 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 JAKMIP3Q5VZ66 844 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 DAGLBQ8NCG7 672 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 CUL5Q93034 780 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 PGBD1Q96JS3 809 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 RBPJLQ9UBG7 517 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
PTPRU-206ENST00000465525 NFIBO00712 420 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 U2AF2P26368 475 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPRU-206ENST00000465525 GNA11P29992 359 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 HOXA13P31271 388 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-206ENST00000465525 STAT3P40763 770 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 OAZ1P54368 228 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 NOSTRINQ8IVI9 506 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 RGS22Q8NE09 1264 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 CLEC4DQ8WXI8 215 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 TNFRSF25Q93038 417 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 TEX13BQ9BXU2 312 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 FOXP1Q9H334 677 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-206ENST00000465525 PNMA2Q9UL42 364 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 MRPL11Q9Y3B7 192 aaKnown RBP19.73■□□□□ 0.75
PTPRU-206ENST00000465525 THSD7BQ9C0I4 1608 aa19.73■□□□□ 0.75
PTPRU-206ENST00000465525 ATP2A1O14983 1001 aa19.72■□□□□ 0.75
PTPRU-206ENST00000465525 TLR2O60603 784 aa19.72■□□□□ 0.75
PTPRU-206ENST00000465525 CFBP00751 764 aa19.72■□□□□ 0.75
PTPRU-206ENST00000465525 MAP2K1Q02750 393 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-206ENST00000465525 TRAF1Q13077 416 aa19.72■□□□□ 0.75
PTPRU-206ENST00000465525 REXO1Q8N1G1 1221 aaKnown RBP19.72■□□□□ 0.75
PTPRU-206ENST00000465525 ZSCAN16Q9H4T2 348 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-206ENST00000465525 RNF146Q9NTX7 359 aa19.72■□□□□ 0.75
PTPRU-206ENST00000465525 M0R2N6 131 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 MRPL12P52815 198 aaKnown RBP19.71■□□□□ 0.75
PTPRU-206ENST00000465525 DNM1Q05193 864 aaKnown RBP19.71■□□□□ 0.75
PTPRU-206ENST00000465525 CRHR2Q13324 411 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 GALNT17Q6IS24 598 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 PIK3AP1Q6ZUJ8 805 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 RNF186Q9NXI6 227 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 MYH7BA7E2Y1 1941 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 MEIS2O14770 477 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 Q3C1V9 767 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 FAM177A1Q8N128 213 aaPredicted RBP19.71■□□□□ 0.75
PTPRU-206ENST00000465525 ANKRD13CQ8N6S4 541 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms