RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CACNB2Q08289 660 aaPredicted RBP13.56□□□□□ -0.24
CUX1-207ENST00000465461 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 SYNE3Q6ZMZ3 975 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 TBC1D5Q92609 795 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 RNF208Q9H0X6 261 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 RIOX1Q9H6W3 641 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
CUX1-207ENST00000465461 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
CUX1-207ENST00000465461 DNAJC25-GNG10A0A024R161 153 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 ZBTB43O43298 467 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
CUX1-207ENST00000465461 CDC27P30260 824 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
CUX1-207ENST00000465461 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
CUX1-207ENST00000465461 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 SLC30A10Q6XR72 485 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 MTMR8Q96EF0 704 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 FGD4Q96M96 766 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 HTTP42858 3142 aa13.55□□□□□ -0.24
CUX1-207ENST00000465461 PTPDC1A2A3K4 754 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 GOLGA8AA7E2F4 631 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 GOLGA8BA8MQT2 603 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 ZBTB5O15062 677 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 IGHA2P01877 340 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 CALM1P0DP23 149 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 CALM2P0DP24 149 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 CALM3P0DP25 149 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 CALML3P27482 149 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 KIF5BP33176 963 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 RTN1Q16799 776 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 TRPV1Q8NER1 839 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 TM6SF1Q9BZW5 370 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
CUX1-207ENST00000465461 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
CUX1-207ENST00000465461 MYH6P13533 1939 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 CNGA1P29973 690 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 ADD1P35611 737 aaKnown RBP13.53□□□□□ -0.24
CUX1-207ENST00000465461 CCT2P78371 535 aaKnown RBP13.53□□□□□ -0.24
CUX1-207ENST00000465461 MAP3K21Q5TCX8 1036 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 OLFML2BQ68BL8 750 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 RNF207Q6ZRF8 634 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
CUX1-207ENST00000465461 DEFB118Q96PH6 123 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 AMNQ9BXJ7 453 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
CUX1-207ENST00000465461 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
CUX1-207ENST00000465461 ASTN1O14525 1302 aa13.53□□□□□ -0.24
CUX1-207ENST00000465461 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 OPLAHO14841 1288 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 DTNBO60941 627 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 GNAQP50148 359 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.25
CUX1-207ENST00000465461 ANAPC15P60006 121 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 RPS6P62753 249 aaKnown RBP13.52□□□□□ -0.25
CUX1-207ENST00000465461 STK3Q13188 491 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
CUX1-207ENST00000465461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
CUX1-207ENST00000465461 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.25
CUX1-207ENST00000465461 TINF2Q9BSI4 451 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 SPZ1Q9BXG8 430 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
CUX1-207ENST00000465461 DIS3Q9Y2L1 958 aaKnown RBP13.52□□□□□ -0.25
CUX1-207ENST00000465461 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 ABCB11O95342 1321 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 RPTORQ8N122 1335 aa13.52□□□□□ -0.25
CUX1-207ENST00000465461 LCTP09848 1927 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 PFASO15067 1338 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 CNTNAP5Q8WYK1 1306 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 CYBAP13498 195 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 SHISA4Q96DD7 197 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 LZTS2Q9BRK4 669 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 COL20A1Q9P218 1284 aa13.51□□□□□ -0.25
CUX1-207ENST00000465461 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
CUX1-207ENST00000465461 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms