RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ZNF365Q70YC5 407 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 MICALL1Q8N3F8 863 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 PPP1R12CQ9BZL4 782 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 FOXP2O15409 715 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 ADCY6O43306 1168 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 PDCP20941 246 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 DSG3P32926 999 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 TRDNQ13061 729 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 TOB2Q14106 344 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-215ENST00000465457 TMEM132BQ14DG7 1078 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 SKOR2Q2VWA4 1001 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-215ENST00000465457 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
HDAC6-215ENST00000465457 ABRAQ8N0Z2 381 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 TINF2Q9BSI4 451 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 LRFN3Q9BTN0 628 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 MROH8Q9H579 483 aa16.11■□□□□ 0.17
HDAC6-215ENST00000465457 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 FLOT1O75955 427 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 MBD4O95243 580 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 BRD1O95696 1058 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 FCER1AP12319 257 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 EXOSC10Q01780 885 aaKnown RBP16.1■□□□□ 0.17
HDAC6-215ENST00000465457 GABPAQ06546 454 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-215ENST00000465457 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 KHSRPQ92945 711 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC6-215ENST00000465457 CABP5Q9NP86 173 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 HOXC10Q9NYD6 342 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
HDAC6-215ENST00000465457 COL4A4P53420 1690 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-215ENST00000465457 MPHOSPH10O00566 681 aaKnown RBP16.09■□□□□ 0.17
HDAC6-215ENST00000465457 APPP05067 770 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 AKR1A1P14550 325 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 MYOGP15173 224 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 MCM5P33992 734 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 RABGGTBP53611 331 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 PPIGQ13427 754 aaKnown RBP eCLIP16.09■□□□□ 0.175e-8■■□□□ 12
HDAC6-215ENST00000465457 KCNA10Q16322 511 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 ME3Q16798 604 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 Q6ZUG5 572 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 KLHDC9Q8NEP7 349 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 MMP19Q99542 508 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
HDAC6-215ENST00000465457 C1QTNF1Q9BXJ1 281 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 NAPBQ9H115 298 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 FBXO28Q9NVF7 368 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 SCN5AQ14524 2016 aa16.09■□□□□ 0.17
HDAC6-215ENST00000465457 MAGEB6P1A0A0J9YX57 407 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 CYP2D6P10635 497 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 CYP2C18P33260 490 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 GIMAP6Q6P9H5 292 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 SIAH1Q8IUQ4 282 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 CCDC83Q8IWF9 413 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 C11orf16Q9NQ32 467 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 KIF3AQ9Y496 699 aa16.08■□□□□ 0.16
HDAC6-215ENST00000465457 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 NT5C2P49902 561 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 CDK7P50613 346 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 EVCP57679 992 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 PSRC1Q6PGN9 363 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-215ENST00000465457 SLC4A4Q9Y6R1 1079 aa16.07■□□□□ 0.16
HDAC6-215ENST00000465457 RFXAPO00287 272 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 LARGE1O95461 756 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-215ENST00000465457 PCP11498 1178 aaKnown RBP16.06■□□□□ 0.16
HDAC6-215ENST00000465457 TDO2P48775 406 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 RAB30Q15771 203 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 KRT40Q6A162 431 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-215ENST00000465457 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 BRF1Q92994 677 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 KRT23Q9C075 422 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 MSRAQ9UJ68 235 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms