RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 IGKV6D-41A0A0C4DH26 115 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 ASB14A6NK59 587 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
TRA2B-208ENST00000465245 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 CEP95Q96GE4 821 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 SCLYQ96I15 445 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
TRA2B-208ENST00000465245 RNF146Q9NTX7 359 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
TRA2B-208ENST00000465245 COL4A4P53420 1690 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-208ENST00000465245 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 ERC2O15083 957 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 DYNC1LI2O43237 492 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-208ENST00000465245 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-208ENST00000465245 TTLL1O95922 423 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 FDX1P10109 184 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 BMP3P12645 472 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 SMPD1P17405 629 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 PTGS1P23219 599 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 PSMC6P62333 389 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 GIMAP6Q6P9H5 292 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 RPAP2Q8IXW5 612 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-208ENST00000465245 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
TRA2B-208ENST00000465245 ZNF287Q9HBT7 754 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 MTMR4Q9NYA4 1195 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 SYNPO2Q9UMS6 1093 aa14.35□□□□□ -0.11
TRA2B-208ENST00000465245 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 PRDM1O75626 825 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 CA3P07451 260 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-208ENST00000465245 STAT2P52630 851 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-208ENST00000465245 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 FBXO16Q8IX29 292 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-208ENST00000465245 SIRT2Q8IXJ6 389 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-208ENST00000465245 MKL1Q969V6 931 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 MTCH2Q9Y6C9 303 aa14.34□□□□□ -0.11
TRA2B-208ENST00000465245 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
TRA2B-208ENST00000465245 RFXAPO00287 272 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 PFKMP08237 780 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 ALAS1P13196 640 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 TDO2P48775 406 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 IQSEC1Q6DN90 963 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 EEPD1Q7L9B9 569 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 VWCEQ96DN2 955 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 ALDH8A1Q9H2A2 487 aaPredicted RBP14.33□□□□□ -0.12
TRA2B-208ENST00000465245 CERS4Q9HA82 394 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 PDGFCQ9NRA1 345 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 PTPRSQ13332 1948 aa14.33□□□□□ -0.12
TRA2B-208ENST00000465245 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 CYP2C9P11712 490 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 TKFCQ3LXA3 575 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 TAPT1Q6NXT6 567 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 DEFB128Q7Z7B8 93 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 FAM160B2Q86V87 743 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
TRA2B-208ENST00000465245 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 TRMT13Q9NUP7 481 aaKnown RBP14.32□□□□□ -0.12
TRA2B-208ENST00000465245 COG5Q9UP83 839 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 Q9Y3F1 56 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 ZNF536O15090 1300 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 PLIN4Q96Q06 1357 aa14.32□□□□□ -0.12
TRA2B-208ENST00000465245 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 ACTN1P12814 892 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 POU3F3P20264 500 aaPredicted RBP14.31□□□□□ -0.12
TRA2B-208ENST00000465245 KRT40Q6A162 431 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 KIAA1211Q6ZU35 1233 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 TET1Q8NFU7 2136 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 APPBP2Q92624 585 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 SLC9A7Q96T83 725 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 LRFN3Q9BTN0 628 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 EPHX3Q9H6B9 360 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 ARIH1Q9Y4X5 557 aaPredicted RBP14.31□□□□□ -0.12
TRA2B-208ENST00000465245 TNKSO95271 1327 aa14.31□□□□□ -0.12
TRA2B-208ENST00000465245 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
TRA2B-208ENST00000465245 BRWD1Q9NSI6 2320 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 EPOPA6NHQ4 379 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 GPAA1O43292 621 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 APPP05067 770 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 MS4A1P11836 297 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 GNAT2P19087 354 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 SLC1A4P43007 532 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 HNRNPUQ00839 825 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRA2B-208ENST00000465245 TMEM31Q5JXX7 168 aa14.3□□□□□ -0.12
TRA2B-208ENST00000465245 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms