RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 RB1CC1Q8TDY2 1594 aa7.59□□□□□ -1.2
UBR4-209ENST00000465036 FFAR3O14843 346 aa7.58□□□□□ -1.2
UBR4-209ENST00000465036 NCKAP1LP55160 1127 aa7.58□□□□□ -1.2
UBR4-209ENST00000465036 ZNF445P59923 1031 aa7.58□□□□□ -1.2
UBR4-209ENST00000465036 GZF1Q9H116 711 aaPredicted RBP7.58□□□□□ -1.2
UBR4-209ENST00000465036 GP6Q9HCN6 339 aa7.58□□□□□ -1.2
UBR4-209ENST00000465036 SF3B6Q9Y3B4 125 aaKnown RBP7.58□□□□□ -1.2
UBR4-209ENST00000465036 H0Y8X5 98 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 CD247P20963 164 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 KRTAP10-2P60368 255 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 ZNF200P98182 395 aaPredicted RBP7.57□□□□□ -1.2
UBR4-209ENST00000465036 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
UBR4-209ENST00000465036 AXDND1Q5T1B0 1012 aaPredicted RBP7.57□□□□□ -1.2
UBR4-209ENST00000465036 ZFYVE27Q5T4F4 411 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
UBR4-209ENST00000465036 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 SYT8Q8NBV8 401 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 BORCS6Q96GS4 357 aa7.57□□□□□ -1.2
UBR4-209ENST00000465036 CNOT11Q9UKZ1 510 aaKnown RBP7.57□□□□□ -1.2
UBR4-209ENST00000465036 NACADO15069 1562 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 TBC1D8O95759 1140 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 KCNC1P48547 511 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 NFKB2Q00653 900 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 PTCHD1Q96NR3 888 aa7.56□□□□□ -1.2
UBR4-209ENST00000465036 FCRL3Q96P31 734 aaPredicted RBP7.56□□□□□ -1.2
UBR4-209ENST00000465036 ADRB1P08588 477 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 GUCY2CP25092 1073 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 SLURP1P55000 103 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 POU4F1Q01851 419 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 EFEMP1Q12805 493 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 VWA3BQ502W6 1294 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 FIBCD1Q8N539 461 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 TMEM87AQ8NBN3 555 aa7.55□□□□□ -1.2
UBR4-209ENST00000465036 METTL5Q9NRN9 209 aaKnown RBP7.55□□□□□ -1.2
UBR4-209ENST00000465036 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
UBR4-209ENST00000465036 DIS3Q9Y2L1 958 aaKnown RBP7.55□□□□□ -1.2
UBR4-209ENST00000465036 ZCCHC6Q5VYS8 1495 aaKnown RBP7.55□□□□□ -1.2
UBR4-209ENST00000465036 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 ITGA4P13612 1032 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 ZNF76P36508 570 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 HTRA3P83110 453 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 RBM10P98175 930 aaKnown RBP7.54□□□□□ -1.2
UBR4-209ENST00000465036 BICRALQ6AI39 1079 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 UNC5AQ6ZN44 842 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 FNIP1Q8TF40 1166 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 FERD3LQ96RJ6 166 aa7.54□□□□□ -1.2
UBR4-209ENST00000465036 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 NCAM1P13591 858 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 L1CAMP32004 1257 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 LIMS1P48059 325 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 FOXO4P98177 505 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 SPATS1Q496A3 300 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
UBR4-209ENST00000465036 RCSD1Q6JBY9 416 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 SAPCD2Q86UD0 394 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 BRF1Q92994 677 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 ADAM7Q9H2U9 754 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 ZNF451Q9Y4E5 1061 aa7.53□□□□□ -1.2
UBR4-209ENST00000465036 FAM86C2PA6NEL3 165 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 GLI4P10075 376 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 ATF2P15336 505 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 PRR5P85299 388 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
UBR4-209ENST00000465036 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 LIPIQ6XZB0 460 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 SUSD2Q9UGT4 822 aa7.52□□□□□ -1.21
UBR4-209ENST00000465036 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
UBR4-209ENST00000465036 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
UBR4-209ENST00000465036 EEF1DP3Q658K8 133 aa7.51□□□□□ -1.21
UBR4-209ENST00000465036 RNF34Q969K3 372 aa7.51□□□□□ -1.21
UBR4-209ENST00000465036 TSPAN17Q96FV3 270 aa7.51□□□□□ -1.21
UBR4-209ENST00000465036 F8W031 263 aaPredicted RBP7.5□□□□□ -1.21
UBR4-209ENST00000465036 IFNGR1P15260 489 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 FANCCQ00597 558 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
UBR4-209ENST00000465036 B3GNT8Q7Z7M8 397 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 WHRNQ9P202 907 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 HCFC2Q9Y5Z7 792 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 SLC12A7Q9Y666 1083 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 PMF1-BGLAPU3KQ54 211 aa7.5□□□□□ -1.21
UBR4-209ENST00000465036 MYO15BQ96JP2 1530 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 CBFA2T2O43439 604 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 TP53P04637 393 aaPredicted RBP7.49□□□□□ -1.21
UBR4-209ENST00000465036 ASGR2P07307 311 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 CD3EP07766 207 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 PLP2Q04941 152 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 RTP5Q14D33 572 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 LSRQ86X29 649 aaPredicted RBP7.49□□□□□ -1.21
UBR4-209ENST00000465036 CPA5Q8WXQ8 436 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 NOL6Q9H6R4 1146 aaKnown RBP7.49□□□□□ -1.21
UBR4-209ENST00000465036 FAN1Q9Y2M0 1017 aa7.49□□□□□ -1.21
UBR4-209ENST00000465036 AURKAO14965 403 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 PRICKLE3O43900 615 aaPredicted RBP7.48□□□□□ -1.21
UBR4-209ENST00000465036 ZNF16P17020 682 aaPredicted RBP7.48□□□□□ -1.21
UBR4-209ENST00000465036 DLX2Q07687 328 aaPredicted RBP7.48□□□□□ -1.21
UBR4-209ENST00000465036 SLC9A5Q14940 896 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms