RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
RPP40-203ENST00000464646 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
RPP40-203ENST00000464646 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
RPP40-203ENST00000464646 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
RPP40-203ENST00000464646 TLR3O15455 904 aaKnown RBP16.25■□□□□ 0.19
RPP40-203ENST00000464646 DYNC1LI2O43237 492 aaPredicted RBP16.25■□□□□ 0.19
RPP40-203ENST00000464646 CALML3P27482 149 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 FPGSQ05932 587 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 FBXO16Q8IX29 292 aaPredicted RBP16.25■□□□□ 0.19
RPP40-203ENST00000464646 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 ESR2Q92731 530 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 FGD4Q96M96 766 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
RPP40-203ENST00000464646 MROH7Q68CQ1 1323 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 HIP1O00291 1037 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 ADCY6O43306 1168 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 ZEB2O60315 1214 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 ICAM1P05362 532 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 GJA9P57773 515 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 NUCB1Q02818 461 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 KIAA1211Q6ZU35 1233 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPP40-203ENST00000464646 TLK2Q86UE8 772 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 TBC1D10CQ8IV04 446 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 PPP1R12CQ9BZL4 782 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 TCP11L1Q9NUJ3 509 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 CYP39A1Q9NYL5 469 aa16.24■□□□□ 0.19
RPP40-203ENST00000464646 ADD3Q9UEY8 706 aaKnown RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
RPP40-203ENST00000464646 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 ITGB8P26012 769 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 USH1GQ495M9 461 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 IQCA1Q86XH1 822 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 RANBP17Q9H2T7 1088 aaKnown RBP16.23■□□□□ 0.19
RPP40-203ENST00000464646 KAT14Q9H8E8 782 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
RPP40-203ENST00000464646 ELP1O95163 1332 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 ZMYM6O95789 1325 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 NEDD4P46934 1319 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 KIAA0355O15063 1070 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 KDM4AO75164 1064 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 FGRP09769 529 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 PDHBP11177 359 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 PCP11498 1178 aaKnown RBP16.22■□□□□ 0.19
RPP40-203ENST00000464646 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
RPP40-203ENST00000464646 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
RPP40-203ENST00000464646 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
RPP40-203ENST00000464646 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 RNF207Q6ZRF8 634 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 TTC14Q96N46 770 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
RPP40-203ENST00000464646 STXBP5LQ9Y2K9 1186 aa16.22■□□□□ 0.19
RPP40-203ENST00000464646 B4E1Z4 1266 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 ARVCFO00192 962 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 NFIBO00712 420 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 SMPD1P17405 629 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 PTGS1P23219 599 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
RPP40-203ENST00000464646 PDE4DQ08499 809 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 FSCN1Q16658 493 aaKnown RBP16.21■□□□□ 0.19
RPP40-203ENST00000464646 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 IQSEC1Q6DN90 963 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 TOX2Q96NM4 488 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 UBA5Q9GZZ9 404 aa16.21■□□□□ 0.19
RPP40-203ENST00000464646 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
RPP40-203ENST00000464646 TIMP1P01033 207 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 ZNF543Q08ER8 600 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
RPP40-203ENST00000464646 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 KATNBL1Q9H079 304 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 CPVLQ9H3G5 476 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 VTA1Q9NP79 307 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
RPP40-203ENST00000464646 CTNNA3Q9UI47 895 aa16.2■□□□□ 0.18
RPP40-203ENST00000464646 DLL1O00548 723 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 MYL3P08590 195 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 EPHB4P54760 987 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPP40-203ENST00000464646 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
RPP40-203ENST00000464646 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 PNMA1Q8ND90 353 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 OSBPL3Q9H4L5 887 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
RPP40-203ENST00000464646 B4DLN1 442 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 CABYRO75952 493 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 ACRP10323 421 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms