RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 GORABQ5T7V8 394 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 SUGP1Q8IWZ8 645 aaKnown RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 CCDC144CPQ8IYA2 1237 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 MRPL38Q96DV4 380 aaKnown RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
SCAF8-205ENST00000464628 PIH1D3Q9NQM4 214 aaKnown RBP13.86□□□□□ -0.19
SCAF8-205ENST00000464628 MED19A0JLT2 244 aaPredicted RBP13.85□□□□□ -0.19
SCAF8-205ENST00000464628 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 IGSF3O75054 1194 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 GJB5O95377 273 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 SUPT20HL2P0C7V6 817 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 LTBRP36941 435 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 SNRNP48Q6IEG0 339 aaKnown RBP13.85□□□□□ -0.19
SCAF8-205ENST00000464628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCAF8-205ENST00000464628 TEX13BQ9BXU2 312 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
SCAF8-205ENST00000464628 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
SCAF8-205ENST00000464628 SMPD1P17405 629 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 CYP7A1P22680 504 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 KCNJ6P48051 423 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 ICA1Q05084 483 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 GPNMBQ14956 572 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 CCDC184Q52MB2 194 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 TIGD5Q53EQ6 642 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 TMEM63BQ5T3F8 832 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 C17orf80Q9BSJ5 609 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 FTOQ9C0B1 505 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCAF8-205ENST00000464628 SH2D4AQ9H788 454 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
SCAF8-205ENST00000464628 MBTPS2O43462 519 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 AKR1B1P15121 316 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 TCTN1Q2MV58 587 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 TCEAL5Q5H9L2 206 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 POP1Q99575 1024 aaKnown RBP13.83□□□□□ -0.2
SCAF8-205ENST00000464628 RAD9AQ99638 391 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 FSD1Q9BTV5 496 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 IRF2BPLQ9H1B7 796 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
SCAF8-205ENST00000464628 EPG5Q9HCE0 2579 aa13.83□□□□□ -0.2
SCAF8-205ENST00000464628 FAM186AA6NE01 2351 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 H0Y858 1186 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 RBAK-RBAKDNI3L0D1 243 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 DYNC1LI2O43237 492 aaPredicted RBP13.82□□□□□ -0.2
SCAF8-205ENST00000464628 ZEB2O60315 1214 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 ZAP70P43403 619 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 FBXO22Q8NEZ5 403 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
SCAF8-205ENST00000464628 ZBED2Q9BTP6 218 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 TLR9Q9NR96 1032 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
SCAF8-205ENST00000464628 ATP2A1O14983 1001 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 NBL1P41271 181 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 ZXDAP98168 799 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 DLX2Q07687 328 aaPredicted RBP13.81□□□□□ -0.2
SCAF8-205ENST00000464628 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
SCAF8-205ENST00000464628 RPAINQ86UA6 219 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 AP5M1Q9H0R1 490 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 Q9Y3F1 56 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 MYH4Q9Y623 1939 aa13.81□□□□□ -0.2
SCAF8-205ENST00000464628 ZNF292O60281 2723 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-205ENST00000464628 AVPR2P30518 371 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 PURAQ00577 322 aaKnown RBP13.8□□□□□ -0.2
SCAF8-205ENST00000464628 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 MTX1Q13505 466 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 CTC1Q2NKJ3 1217 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 FAM133AQ8N9E0 248 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 PPP1R13LQ8WUF5 828 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 SSH1Q8WYL5 1049 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 ASIC4Q96FT7 647 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 CTNNA3Q9UI47 895 aa13.8□□□□□ -0.2
SCAF8-205ENST00000464628 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
SCAF8-205ENST00000464628 PTPRZ1P23471 2315 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-205ENST00000464628 GVINP1Q7Z2Y8 2422 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 SRGAP3O43295 1099 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 CYP2D6P10635 497 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 EEF2P13639 858 aaKnown RBP13.79□□□□□ -0.2
SCAF8-205ENST00000464628 CLUL1Q15846 466 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 PTPROQ16827 1216 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 RETREG2Q8NC44 543 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-205ENST00000464628 MEIS3Q99687 375 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 NSUN3Q9H649 340 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms