RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 CYP39A1Q9NYL5 469 aa20.51■□□□□ 0.87
UFM1-204ENST00000464423 DIS3Q9Y2L1 958 aaKnown RBP20.51■□□□□ 0.87
UFM1-204ENST00000464423 SLC12A7Q9Y666 1083 aa20.51■□□□□ 0.87
UFM1-204ENST00000464423 ASTN1O14525 1302 aa20.51■□□□□ 0.87
UFM1-204ENST00000464423 SMCHD1A6NHR9 2005 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
UFM1-204ENST00000464423 SOWAHBA6NEL2 793 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 POTEB2H3BUK9 544 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 EPB41L2O43491 1005 aaKnown RBP20.5■□□□□ 0.87
UFM1-204ENST00000464423 PLEKHA8P1O95397 391 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 CYBAP13498 195 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 SGMS1Q86VZ5 419 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 HOMER1Q86YM7 354 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 FAM133AQ8N9E0 248 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 MTMR8Q96EF0 704 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 PIGSQ96S52 555 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 TINF2Q9BSI4 451 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 RIOX1Q9H6W3 641 aa20.5■□□□□ 0.87
UFM1-204ENST00000464423 ZNFX1Q9P2E3 1918 aaKnown RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 TFRCP02786 760 aaKnown RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 HMGB1P09429 215 aaKnown RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 RPS6KB1P23443 525 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 CNGA1P29973 690 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 BAATQ14032 418 aaPredicted RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 SLC30A10Q6XR72 485 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 Q6ZUG5 572 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 MICU3Q86XE3 530 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 FBXO11Q86XK2 927 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 CTCFLQ8NI51 663 aaPredicted RBP20.49■□□□□ 0.87
UFM1-204ENST00000464423 MAP3K14Q99558 947 aa20.49■□□□□ 0.87
UFM1-204ENST00000464423 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
UFM1-204ENST00000464423 LHX8Q68G74 356 aa20.48■□□□□ 0.87
UFM1-204ENST00000464423 APOA5Q6Q788 366 aa20.48■□□□□ 0.87
UFM1-204ENST00000464423 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
UFM1-204ENST00000464423 TBC1D5Q92609 795 aa20.48■□□□□ 0.87
UFM1-204ENST00000464423 CRISPLD2Q9H0B8 497 aa20.48■□□□□ 0.87
UFM1-204ENST00000464423 PFASO15067 1338 aa20.48■□□□□ 0.87
UFM1-204ENST00000464423 KIAA0100Q14667 2235 aaKnown RBP20.47■□□□□ 0.87
UFM1-204ENST00000464423 KLF18A0A0U1RQI7 1052 aa20.47■□□□□ 0.87
UFM1-204ENST00000464423 PTPDC1A2A3K4 754 aa20.47■□□□□ 0.87
UFM1-204ENST00000464423 ZBTB5O15062 677 aa20.47■□□□□ 0.87
UFM1-204ENST00000464423 APOBRQ0VD83 1088 aa20.47■□□□□ 0.87
UFM1-204ENST00000464423 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
UFM1-204ENST00000464423 PLXNA1Q9UIW2 1896 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 CALM1P0DP23 149 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 CALM2P0DP24 149 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 CALM3P0DP25 149 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 CALML3P27482 149 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 PSMA5P28066 241 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 KIF5BP33176 963 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 FGD1P98174 961 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 MLLT1Q03111 559 aaPredicted RBP20.46■□□□□ 0.87
UFM1-204ENST00000464423 MAMDC4Q6UXC1 1216 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 RNF207Q6ZRF8 634 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 ZNF467Q7Z7K2 595 aaPredicted RBP20.46■□□□□ 0.87
UFM1-204ENST00000464423 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 FANCBQ8NB91 859 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 BRF1Q92994 677 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 AMNQ9BXJ7 453 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
UFM1-204ENST00000464423 ZSWIM6Q9HCJ5 1215 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 ABCB11O95342 1321 aa20.46■□□□□ 0.87
UFM1-204ENST00000464423 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
UFM1-204ENST00000464423 OPLAHO14841 1288 aa20.45■□□□□ 0.86
UFM1-204ENST00000464423 ZNF865P0CJ78 1059 aaPredicted RBP20.45■□□□□ 0.86
UFM1-204ENST00000464423 RPS6P62753 249 aaKnown RBP20.45■□□□□ 0.86
UFM1-204ENST00000464423 C8orf34Q49A92 452 aa20.45■□□□□ 0.86
UFM1-204ENST00000464423 DIS3LQ8TF46 1054 aaKnown RBP20.45■□□□□ 0.86
UFM1-204ENST00000464423 DDX20Q9UHI6 824 aaKnown RBP20.45■□□□□ 0.86
UFM1-204ENST00000464423 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
UFM1-204ENST00000464423 NAP1L2Q9ULW6 460 aaPredicted RBP20.45■□□□□ 0.86
UFM1-204ENST00000464423 ZBTB43O43298 467 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 MNX1P50219 401 aaPredicted RBP20.44■□□□□ 0.86
UFM1-204ENST00000464423 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 RUFY3Q7L099 469 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 ARMCX2Q7L311 632 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 MSL3Q8N5Y2 521 aaKnown RBP20.44■□□□□ 0.86
UFM1-204ENST00000464423 LENG1Q96BZ8 264 aaPredicted RBP20.44■□□□□ 0.86
UFM1-204ENST00000464423 SPZ1Q9BXG8 430 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 FAM217BQ9NTX9 383 aaPredicted RBP20.44■□□□□ 0.86
UFM1-204ENST00000464423 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.44■□□□□ 0.86
UFM1-204ENST00000464423 OGDHLQ9ULD0 1010 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 PCDHA1Q9Y5I3 950 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 SYNGAP1Q96PV0 1343 aa20.44■□□□□ 0.86
UFM1-204ENST00000464423 PNMA6FA0A0J9YX94 578 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 CDC27P30260 824 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 UBE2Q1Q7Z7E8 422 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 LZTS2Q9BRK4 669 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
UFM1-204ENST00000464423 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 ZHX1Q9UKY1 873 aaPredicted RBP20.43■□□□□ 0.86
UFM1-204ENST00000464423 CNPY2Q9Y2B0 182 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 MRPL11Q9Y3B7 192 aaKnown RBP20.43■□□□□ 0.86
UFM1-204ENST00000464423 LCTP09848 1927 aa20.43■□□□□ 0.86
UFM1-204ENST00000464423 GOLGA8AA7E2F4 631 aa20.42■□□□□ 0.86
UFM1-204ENST00000464423 GOLGA8BA8MQT2 603 aa20.42■□□□□ 0.86
UFM1-204ENST00000464423 SEPT4O43236 478 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms