RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 F13A1P00488 732 aa5.09□□□□□ -1.6
SCFD1-204ENST00000463622 ST13P50502 369 aaKnown RBP5.09□□□□□ -1.6
SCFD1-204ENST00000463622 SLC23A3Q6PIS1 610 aa5.09□□□□□ -1.6
SCFD1-204ENST00000463622 CARS2Q9HA77 564 aaKnown RBP5.09□□□□□ -1.6
SCFD1-204ENST00000463622 CAPN6Q9Y6Q1 641 aa5.09□□□□□ -1.6
SCFD1-204ENST00000463622 COL5A2P05997 1499 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-204ENST00000463622 ADGRB1O14514 1584 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 RGPD8O14715 1765 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-204ENST00000463622 CASZ1Q86V15 1759 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 EXOC5O00471 708 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 BIN1O00499 593 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 GRIN3BO60391 1043 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 HSPA6P17066 643 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 GBP2P32456 591 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-204ENST00000463622 CLCN7P51798 805 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 ATG4DQ86TL0 474 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-204ENST00000463622 FAM168AQ92567 244 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 UBE2FQ969M7 185 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 CRELD1Q96HD1 420 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 ZSWIM5Q9P217 1185 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 ST14Q9Y5Y6 855 aa5.08□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-204ENST00000463622 RLBP1P12271 317 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 PLCG1P19174 1290 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF827Q17R98 1081 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 TOM1L2Q6ZVM7 507 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 MCATQ8IVS2 390 aaKnown RBP5.07□□□□□ -1.6
SCFD1-204ENST00000463622 MRPL41Q8IXM3 137 aaKnown RBP5.07□□□□□ -1.6
SCFD1-204ENST00000463622 WDR17Q8IZU2 1322 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 BRD4O60885 1362 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-204ENST00000463622 PEAK1Q9H792 1746 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 FAM221AA4D161 298 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 YBX3P16989 372 aaKnown RBP eCLIP5.07□□□□□ -1.65e-7■■■□□ 14.6
SCFD1-204ENST00000463622 PDE4BQ07343 736 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 TNK2Q07912 1038 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF648Q5T619 568 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-204ENST00000463622 FYB2Q5VWT5 728 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 SLC6A19Q695T7 634 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 TRPM1Q7Z4N2 1603 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 ARHGEF25Q86VW2 580 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 RELL1Q8IUW5 271 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 DNAJC5GQ8N7S2 189 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 FBXO27Q8NI29 283 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 COPRSQ9NQ92 184 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 CRYBG1Q9Y4K1 1723 aa5.07□□□□□ -1.6
SCFD1-204ENST00000463622 CILPO75339 1184 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 BPNT1O95861 308 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 LMNB2Q03252 620 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 FAM13CQ8NE31 585 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 NLGN2Q8NFZ4 835 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 TMEM74Q96NL1 305 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 LMO7Q8WWI1 1683 aa5.06□□□□□ -1.6
SCFD1-204ENST00000463622 GOLGB1Q14789 3259 aaKnown RBP5.06□□□□□ -1.6
SCFD1-204ENST00000463622 TLR3O15455 904 aaKnown RBP5.05□□□□□ -1.6
SCFD1-204ENST00000463622 POLD1P28340 1107 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 GOLM1Q8NBJ4 401 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 DNAJB8Q8NHS0 232 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 GATAD2BQ8WXI9 593 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 RHOVQ96L33 236 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 Q96M66 194 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 CTNND2Q9UQB3 1225 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-204ENST00000463622 TACC3Q9Y6A5 838 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 MYOM1P52179 1685 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 RGPD3A6NKT7 1758 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-204ENST00000463622 RGPD4Q7Z3J3 1758 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 CHURC1-FNTBB4DL54 471 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 LRRN2O75325 713 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 C8AP07357 584 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 C22orf34Q6ZV56 151 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 PPP1R13LQ8WUF5 828 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 BCL2L13Q9BXK5 485 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 KBTBD4Q9NVX7 518 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 CEP131Q9UPN4 1083 aa5.05□□□□□ -1.6
SCFD1-204ENST00000463622 PARP4Q9UKK3 1724 aaKnown RBP5.04□□□□□ -1.6
SCFD1-204ENST00000463622 PNPLA7Q6ZV29 1317 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 CYP7A1P22680 504 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF124Q15973 351 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 SNAP47Q5SQN1 464 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF746Q6NUN9 644 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-204ENST00000463622 RSRP1Q9BUV0 290 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCFD1-204ENST00000463622 REV1Q9UBZ9 1251 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 ADAM30Q9UKF2 790 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 ATP10DQ9P241 1426 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 ADCY9O60503 1353 aa5.04□□□□□ -1.6
SCFD1-204ENST00000463622 DNAJA2O60884 412 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 CCDC84Q86UT8 332 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-204ENST00000463622 POU5F2Q8N7G0 328 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 KCNH5Q8NCM2 988 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 FLAD1Q8NFF5 587 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 BAHD1Q8TBE0 780 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-204ENST00000463622 LIN37Q96GY3 246 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-204ENST00000463622 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 LMCD1Q9NZU5 365 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 CD2APQ9Y5K6 639 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms