RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MLKLQ8NB16 471 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 DCAF4Q8WV16 495 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 FAM151AQ8WW52 585 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 OFD1O75665 1012 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
VAPB-203ENST00000463370 TNNI2P48788 182 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 CDC37Q16543 378 aaPredicted RBP14.51□□□□□ -0.09
VAPB-203ENST00000463370 PPP4R3BQ5MIZ7 849 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 TRIML1Q8N9V2 468 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 ACER1Q8TDN7 264 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 TPM3P06753 285 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 PRPHP41219 470 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 TECP42680 631 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 NOLC1Q14978 699 aaKnown RBP eCLIP14.51□□□□□ -0.09
VAPB-203ENST00000463370 R3HDM1Q15032 1099 aaKnown RBP14.51□□□□□ -0.09
VAPB-203ENST00000463370 USP17L6PQ6QN14 398 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
VAPB-203ENST00000463370 MTFR1LQ9H019 292 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
VAPB-203ENST00000463370 MYH4Q9Y623 1939 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 LAD1O00515 517 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 WNT10BO00744 389 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 COBLO75128 1261 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 STAT6P42226 847 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 TPM4P67936 248 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 PPP1R18Q6NYC8 613 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 GMCL1P1Q8NEA9 526 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 AGBL3Q8NEM8 1001 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 HERC5Q9UII4 1024 aaKnown RBP14.5□□□□□ -0.09
VAPB-203ENST00000463370 NFE2L3Q9Y4A8 694 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 KIF13BQ9NQT8 1826 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 PSME4Q14997 1843 aa14.5□□□□□ -0.09
VAPB-203ENST00000463370 TMEM232C9JQI7 657 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 POLD1P28340 1107 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 UBA7P41226 1012 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 KLHL10Q6JEL2 608 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 CUL5Q93034 780 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 GJA10Q969M2 543 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 ZBED3Q96IU2 234 aaPredicted RBP14.49□□□□□ -0.09
VAPB-203ENST00000463370 GSDMAQ96QA5 445 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 MTMR9Q96QG7 549 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 P2RX7Q99572 595 aaKnown RBP14.49□□□□□ -0.09
VAPB-203ENST00000463370 VPS33BQ9H267 617 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 PSTPIP2Q9H939 334 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 PCDHA1Q9Y5I3 950 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 PPP1R3GB7ZBB8 358 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 TXLNAP40222 546 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 TXKP42681 527 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 PRELPP51888 382 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 STX17P56962 302 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 RASSF8Q8NHQ8 419 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 ENOX1Q8TC92 643 aaKnown RBP14.49□□□□□ -0.09
VAPB-203ENST00000463370 GMCL1Q96IK5 515 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 MMTAG2Q9BU76 263 aaKnown RBP14.49□□□□□ -0.09
VAPB-203ENST00000463370 SAMSN1Q9NSI8 373 aaKnown RBP14.49□□□□□ -0.09
VAPB-203ENST00000463370 INTS13Q9NVM9 706 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 PGAP2Q9UHJ9 254 aa14.49□□□□□ -0.09
VAPB-203ENST00000463370 GTPBP6O43824 516 aaPredicted RBP14.48□□□□□ -0.09
VAPB-203ENST00000463370 ZNF18P17022 549 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 RRAGBQ5VZM2 374 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 TMC6Q7Z403 805 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 CCDC84Q86UT8 332 aaPredicted RBP14.48□□□□□ -0.09
VAPB-203ENST00000463370 CCDC34Q96HJ3 373 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 SERPINC1P01008 464 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 BMP3P12645 472 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 PLCG1P19174 1290 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 UBASH3AP57075 661 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 IKQ13123 557 aaPredicted RBP14.48□□□□□ -0.09
VAPB-203ENST00000463370 CIAPIN1Q6FI81 312 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 CABP7Q86V35 215 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 UIMC1Q96RL1 719 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 MYOZ2Q9NPC6 264 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 SPTLC3Q9NUV7 552 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 ZBTB21Q9ULJ3 1066 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 BCS1LQ9Y276 419 aa14.48□□□□□ -0.09
VAPB-203ENST00000463370 RASSF7Q02833 373 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 CALCRLQ16602 461 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 USH1GQ495M9 461 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 IGSF22Q8N9C0 903 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
VAPB-203ENST00000463370 DACH1Q9UI36 760 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 RPN1P04843 607 aaKnown RBP14.47□□□□□ -0.09
VAPB-203ENST00000463370 MRPL12P52815 198 aaKnown RBP14.47□□□□□ -0.09
VAPB-203ENST00000463370 SYDE2Q5VT97 1194 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 JDP2Q8WYK2 163 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
VAPB-203ENST00000463370 PYM1Q9BRP8 204 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms