RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 CYBBP04839 570 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 TFE3P19532 575 aaPredicted RBP4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 RAD51AP2Q09MP3 1159 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 RGL3Q3MIN7 710 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 TMEM201Q5SNT2 666 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 SNAP47Q5SQN1 464 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 DPY19L2P1Q6NXN4 242 aa4.51□□□□□ -1.69
NDUFA4-202ENST00000463308 LMNB2Q03252 620 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 R3HDM1Q15032 1099 aaKnown RBP4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 BBS9Q3SYG4 887 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 FAM26FQ5R3K3 315 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 ZNF585AQ6P3V2 769 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 AEBP1Q8IUX7 1158 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 DNERQ8NFT8 737 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 GATAD2BQ8WXI9 593 aa4.5□□□□□ -1.69
NDUFA4-202ENST00000463308 MROH6A6NGR9 719 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 FKTNO75072 461 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 SYPP08247 313 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 RAG1P15918 1043 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 GBP2P32456 591 aaPredicted RBP4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 CWF19L2Q2TBE0 894 aaKnown RBP4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 SPDYAQ5MJ70 313 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 PHC3Q8NDX5 983 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 SPATA6Q9NWH7 488 aaPredicted RBP4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 REV1Q9UBZ9 1251 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 VTI1BQ9UEU0 232 aa4.49□□□□□ -1.69
NDUFA4-202ENST00000463308 ANKRD33BA6NCL7 494 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 SORBS3O60504 671 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 HTR3BO95264 441 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 DBHP09172 617 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 INHBCP55103 352 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 CAMK2GQ13555 558 aaPredicted RBP4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 MPP2Q14168 576 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 MEI1Q5TIA1 1274 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 ZPBP2Q6X784 338 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 PLEKHH3Q7Z736 793 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 CIR1Q86X95 450 aaPredicted RBP4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 ZG16BQ96DA0 208 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 IMPACTQ9P2X3 320 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 PARP2Q9UGN5 583 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 TLR6Q9Y2C9 796 aa4.48□□□□□ -1.69
NDUFA4-202ENST00000463308 A0A087X1B8 175 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 A0A1W2PQ27 194 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 A0A1W2PQ64 194 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 A0A1W2PQC6 194 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 A0A1W2PQD8 194 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 SMARCA5O60264 1052 aaPredicted RBP4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 ASGR2P07307 311 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 MCM7P33993 719 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 RBM10P98175 930 aaKnown RBP4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 MIIPQ5JXC2 388 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 BHLHA9Q7RTU4 235 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 TMEM74Q96NL1 305 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 ERVK13-1Q9NX77 482 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 CORINQ9Y5Q5 1042 aa4.47□□□□□ -1.69
NDUFA4-202ENST00000463308 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 UPK3BL1B0FP48 263 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 UPK3BL2E5RIL1 263 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 MC3RP41968 323 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 DAB2P98082 770 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 FOXE3Q13461 319 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 BNC2Q6ZN30 1099 aaPredicted RBP4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 TMC4Q7Z404 712 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 RGS22Q8NE09 1264 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 TRIM8Q9BZR9 551 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 RNF19AQ9NV58 838 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 ZFR2Q9UPR6 939 aaKnown RBP4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 PRR36Q9H6K5 1346 aa4.46□□□□□ -1.7
NDUFA4-202ENST00000463308 USP31Q70CQ4 1352 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 ROBO2Q9HCK4 1378 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 A0A1W2PQJ5 194 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 CLEC3AO75596 197 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 ZNF202O95125 648 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 F13A1P00488 732 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 PF4P02776 101 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 CCNFP41002 786 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 PRR5P85299 388 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 SND1Q7KZF4 910 aaKnown RBP eCLIP4.45□□□□□ -1.74e-10■■■■■ 28
NDUFA4-202ENST00000463308 REC114Q7Z4M0 266 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 GOLM1Q8NBJ4 401 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 KIF2CQ99661 725 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 GMIPQ9P107 970 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 PLA2G2DQ9UNK4 145 aa4.45□□□□□ -1.7
NDUFA4-202ENST00000463308 RGS13O14921 159 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 ERCC3P19447 782 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 NAT16Q8N8M0 369 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 ALG3Q92685 438 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 ZBTB8AQ96BR9 441 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 RSRP1Q9BUV0 290 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 MKRN2Q9H000 416 aaKnown RBP4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 SUPT16HQ9Y5B9 1047 aaKnown RBP4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 HCFC2Q9Y5Z7 792 aa4.44□□□□□ -1.7
NDUFA4-202ENST00000463308 FAM221AA4D161 298 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms