RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 GNAQP50148 359 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 CDC37Q16543 378 aaPredicted RBP15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 UBE2Q1Q7Z7E8 422 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 FAM133AQ8N9E0 248 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 DDX20Q9UHI6 824 aaKnown RBP15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 SEPT4O43236 478 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 FARP2O94887 1054 aaPredicted RBP15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 CCND3P30281 292 aaPredicted RBP15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 SNAP25P60880 206 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 EXOSC10Q01780 885 aaKnown RBP15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 ZNF654Q8IZM8 581 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 CYP39A1Q9NYL5 469 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 MYH6P13533 1939 aa15.21■□□□□ 0.03
R3HDM1-213ENST00000463230 ASB14A6NK59 587 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 NFXL1Q6ZNB6 911 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 CTCFLQ8NI51 663 aaPredicted RBP15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 JMJD4Q9H9V9 463 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 RCAN1P53805 252 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 LHX8Q68G74 356 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 MRPL11Q9Y3B7 192 aaKnown RBP15.2■□□□□ 0.02
R3HDM1-213ENST00000463230 ZBTB5O15062 677 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 PSMA5P28066 241 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 FGD4Q96M96 766 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 SPZ1Q9BXG8 430 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 SENP2Q9HC62 589 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 ADD3Q9UEY8 706 aaKnown RBP15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 FBXL16Q8N461 479 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 MORC4Q8TE76 937 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 HTATIP2Q9BUP3 242 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 ABHD16BQ9H3Z7 469 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 MAP3K20Q9NYL2 800 aaKnown RBP15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 SLC12A7Q9Y666 1083 aa15.19■□□□□ 0.02
R3HDM1-213ENST00000463230 LCTP09848 1927 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 B4DLN1 442 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 MRPL12P52815 198 aaKnown RBP15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 GHRHRQ02643 423 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 NSMFQ6X4W1 530 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 SNX14Q9Y5W7 946 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 SMCHD1A6NHR9 2005 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 LRRC37A2A6NM11 1700 aa15.18■□□□□ 0.02
R3HDM1-213ENST00000463230 ZNF865P0CJ78 1059 aaPredicted RBP15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 AKR1A1P14550 325 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 CNGA1P29973 690 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 USP26Q9BXU7 913 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 CPVLQ9H3G5 476 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 SOWAHBA6NEL2 793 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 NFIBO00712 420 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 SNAI1O95863 264 aaPredicted RBP15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 BAATQ14032 418 aaPredicted RBP15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 ADCK5Q3MIX3 580 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 BLOC1S2Q6QNY1 142 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 DNERQ8NFT8 737 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
R3HDM1-213ENST00000463230 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 TM6SF1Q9BZW5 370 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 DNM1LO00429 736 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 RARBP10826 455 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 USH1GQ495M9 461 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 VAT1LQ9HCJ6 419 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
R3HDM1-213ENST00000463230 APOA5Q6Q788 366 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 FANCBQ8NB91 859 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms