RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 CYP39A1Q9NYL5 469 aa10.08□□□□□ -0.8
TMEM254-208ENST00000463209 PTPDC1A2A3K4 754 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 PPP1R11O60927 126 aaPredicted RBP10.07□□□□□ -0.8
TMEM254-208ENST00000463209 PGK1P00558 417 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 ZNF865P0CJ78 1059 aaPredicted RBP10.07□□□□□ -0.8
TMEM254-208ENST00000463209 CPA1P15085 419 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 CALML3P27482 149 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 BAATQ14032 418 aaPredicted RBP10.07□□□□□ -0.8
TMEM254-208ENST00000463209 NECTIN1Q15223 517 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 CCDC178Q5BJE1 867 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 TMEM63BQ5T3F8 832 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 PRPF38BQ5VTL8 546 aaKnown RBP10.07□□□□□ -0.8
TMEM254-208ENST00000463209 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 NECAB2Q7Z6G3 386 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 NUP133Q8WUM0 1156 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 JMJD4Q9H9V9 463 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 LY9Q9HBG7 655 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
TMEM254-208ENST00000463209 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
TMEM254-208ENST00000463209 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 ERICH2A1L162 156 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 SH2B2O14492 632 aaPredicted RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 SEPT4O43236 478 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 FDX1P10109 184 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 ATN1P54259 1190 aaPredicted RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 GRM4Q14833 912 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 ADCK5Q3MIX3 580 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 ASPRV1Q53RT3 343 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 GPATCH4Q5T3I0 446 aaKnown RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 CASC1Q6TDU7 716 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 FBXO16Q8IX29 292 aaPredicted RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 CMTR1Q8N1G2 835 aaKnown RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 FAM133AQ8N9E0 248 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 TBC1D5Q92609 795 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 HTATIP2Q9BUP3 242 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 ZMYND8Q9ULU4 1186 aaPredicted RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 CNPY2Q9Y2B0 182 aa10.06□□□□□ -0.8
TMEM254-208ENST00000463209 DIS3Q9Y2L1 958 aaKnown RBP10.06□□□□□ -0.8
TMEM254-208ENST00000463209 EVI5O60447 810 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 COL6A1P12109 1028 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 SYN1P17600 705 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 LRRC26Q2I0M4 334 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 CCDC144BQ3MJ40 725 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 NFXL1Q6ZNB6 911 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 RNF207Q6ZRF8 634 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
TMEM254-208ENST00000463209 ZNF654Q8IZM8 581 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 PIGSQ96S52 555 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 SENP6Q9GZR1 1112 aaPredicted RBP10.05□□□□□ -0.8
TMEM254-208ENST00000463209 KATNBL1Q9H079 304 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 PDGFCQ9NRA1 345 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 SYNGAP1Q96PV0 1343 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 SYNRGQ9UMZ2 1314 aa10.05□□□□□ -0.8
TMEM254-208ENST00000463209 hCG_1642624A0A1W2PR95 340 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
TMEM254-208ENST00000463209 CYTH3O43739 400 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 PLEKHA8P1O95397 391 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 RARBP10826 455 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 AKR1A1P14550 325 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 MCM5P33992 734 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 ADCYAP1R1P41586 468 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 ALDH5A1P51649 535 aaPredicted RBP10.04□□□□□ -0.8
TMEM254-208ENST00000463209 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
TMEM254-208ENST00000463209 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
TMEM254-208ENST00000463209 TROAPQ12815 778 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 SART3Q15020 963 aaKnown RBP10.04□□□□□ -0.8
TMEM254-208ENST00000463209 LRRC41Q15345 812 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 MAMDC4Q6UXC1 1216 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 CATIPQ7Z7H3 387 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 COL20A1Q9P218 1284 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 WDR19Q8NEZ3 1342 aa10.04□□□□□ -0.8
TMEM254-208ENST00000463209 DNM1LO00429 736 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 OPLAHO14841 1288 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 MSCO60682 206 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 NT5C2P49902 561 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 BEX3Q00994 111 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 NOL8Q76FK4 1167 aaKnown RBP10.03□□□□□ -0.8
TMEM254-208ENST00000463209 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
TMEM254-208ENST00000463209 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
TMEM254-208ENST00000463209 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
TMEM254-208ENST00000463209 FAM184BQ9ULE4 1060 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
TMEM254-208ENST00000463209 ABCB11O95342 1321 aa10.03□□□□□ -0.8
TMEM254-208ENST00000463209 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms