RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 KDM4AO75164 1064 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 CHMLP26374 656 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 CST5P28325 142 aaPredicted RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 ACLYP53396 1101 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 GJA9P57773 515 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 NKX3-2P78367 333 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 TLE2Q04725 743 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 TRIM60Q495X7 471 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 MUM1L1Q5H9M0 696 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 CCSAPQ6IQ19 270 aaPredicted RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 NSMFQ6X4W1 530 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 PNMA1Q8ND90 353 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 RGS22Q8NE09 1264 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 TOX2Q96NM4 488 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 UPF3AQ9H1J1 476 aaKnown RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 KAT14Q9H8E8 782 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 ADD3Q9UEY8 706 aaKnown RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 Q9Y3F1 56 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 ELP1O95163 1332 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 NEDD4P46934 1319 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
PTPRF-210ENST00000463041 RAD50Q92878 1312 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 SYNRGQ9UMZ2 1314 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 MYO9BQ13459 2157 aa8.54□□□□□ -1.04
PTPRF-210ENST00000463041 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 DCDC2CA8MYV0 355 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 B4DLN1 442 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 C6orf222P0C671 652 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 MRPL12P52815 198 aaKnown RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 IRX6P78412 446 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 TRDNQ13061 729 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 BAATQ14032 418 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 MORC4Q8TE76 937 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 VTI1AQ96AJ9 217 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 GLT1D1Q96MS3 346 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 STARD7Q9NQZ5 370 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 U3KPZ7 1027 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-210ENST00000463041 WDR19Q8NEZ3 1342 aa8.53□□□□□ -1.04
PTPRF-210ENST00000463041 TRIM43BA6NCK2 446 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 KIAA0355O15063 1070 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 ZEB2O60315 1214 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 CABYRO75952 493 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 ASGR1P07306 291 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 CLTBP09497 229 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 CDK7P50613 346 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 ASPRV1Q53RT3 343 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 TAPT1Q6NXT6 567 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 RNF207Q6ZRF8 634 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 NOL8Q76FK4 1167 aaKnown RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 ENAHQ8N8S7 591 aaPredicted RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 DNERQ8NFT8 737 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 CLEC4DQ8WXI8 215 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 TRIM43Q96BQ3 446 aaPredicted RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 LENG1Q96BZ8 264 aaPredicted RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 MPHOSPH6Q99547 160 aaKnown RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 UBAC1Q9BSL1 405 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 SEZ6LQ9BYH1 1024 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 UBA5Q9GZZ9 404 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 VTA1Q9NP79 307 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 PDLIM7Q9NR12 457 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 GNEQ9Y223 722 aaKnown RBP8.52□□□□□ -1.05
PTPRF-210ENST00000463041 MROH7Q68CQ1 1323 aa8.52□□□□□ -1.05
PTPRF-210ENST00000463041 RBM47A0AV96 593 aaKnown RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 PTPDC1A2A3K4 754 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 ARVCFO00192 962 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 SOX1O00570 391 aaPredicted RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 NFIBO00712 420 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 CTAGE5O15320 804 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 SGSM2O43147 1006 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 ADCY6O43306 1168 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 PARP1P09874 1014 aaKnown RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 GOLGA8HP0CJ92 632 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 RAG1P15918 1043 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 RPS6P62753 249 aaKnown RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 PTH1RQ03431 593 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 FAAP100Q0VG06 881 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 SEC23AQ15436 765 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 IFIT1BQ5T764 474 aaKnown RBP8.51□□□□□ -1.05
PTPRF-210ENST00000463041 KIAA1211Q6ZU35 1233 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 MCF2L2Q86YR7 1114 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 ADGRF4Q8IZF3 695 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 MAP4K1Q92918 833 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 BADQ92934 168 aa8.51□□□□□ -1.05
PTPRF-210ENST00000463041 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms