RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 DYNC1LI2O43237 492 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 SART1O43290 800 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 GLRX3O76003 335 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 PRKD3O94806 890 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 KRT18P05783 430 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 PREPP48147 710 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 IL2P60568 153 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 TRIM28Q13263 835 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 UBE4AQ14139 1066 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 SYDE2Q5VT97 1194 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 CCSAPQ6IQ19 270 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 MTDHQ86UE4 582 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 PPIL6Q8IXY8 311 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 IGSF22Q8N9C0 903 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 SLC16A10Q8TF71 515 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 FBLIM1Q8WUP2 373 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 GPR101Q96P66 508 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 PSMG3-AS1Q96PY0 264 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 SPOCK3Q9BQ16 436 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 MCMBPQ9BTE3 642 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 CRTAC1Q9NQ79 661 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 GPRC5CQ9NQ84 441 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 CHST7Q9NS84 486 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 TPX2Q9ULW0 747 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 APOBEC2Q9Y235 224 aaKnown RBP5.04□□□□□ -1.6
GPNMB-205ENST00000463011 E2F8A0AVK6 867 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 F8W735 103 aaPredicted RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 STXBP3O00186 592 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 CBX4O00257 560 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 ARNTLO00327 626 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 TERTO14746 1132 aaKnown RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 PRPF3O43395 683 aaKnown RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SIGLEC6O43699 453 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 GAS2O43903 313 aaKnown RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 FKBP9O95302 570 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 PRAMEF1O95521 474 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 THBDP07204 575 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 CD3EP07766 207 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SRGAP2CP0DJJ0 459 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SLURP2P0DP57 97 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 ZSCAN20P17040 1043 aaPredicted RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 ADCYAP1R1P41586 468 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 POU4F1Q01851 419 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 CDK5R2Q13319 367 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 MLC1Q15049 377 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 IQSEC1Q6DN90 963 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 GPAT2Q6NUI2 795 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 PPP4R4Q6NUP7 873 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SHISA2Q6UWI4 295 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 ANKLE2Q86XL3 938 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 ZC3H7AQ8IWR0 971 aaKnown RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SMC5Q8IY18 1101 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 IFNL3Q8IZI9 196 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 TOP6BLQ8N6T0 577 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 WHAMMQ8TF30 809 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 FRS2Q8WU20 508 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SEMA6CQ9H3T2 930 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 PRR13Q9NZ81 148 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 TMEFF2Q9UIK5 374 aaPredicted RBP5.03□□□□□ -1.6
GPNMB-205ENST00000463011 SPEF1Q9Y4P9 236 aa5.03□□□□□ -1.6
GPNMB-205ENST00000463011 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 C2orf71A6NGG8 1288 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 WDR64B1ANS9 1081 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 PLIN1O60240 522 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 MSCO60682 206 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 FBXO21O94952 628 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 CBX7O95931 251 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 EOMESO95936 686 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 F2P00734 622 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 NAT1P18440 290 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 CYP7A1P22680 504 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 GPR85P60893 370 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 DSG1Q02413 1049 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 NMIQ13287 307 aaPredicted RBP5.02□□□□□ -1.61
GPNMB-205ENST00000463011 PTPN21Q16825 1174 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 XP32Q5T750 250 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 FAM102BQ5T8I3 360 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 CWF19L1Q69YN2 538 aaKnown RBP5.02□□□□□ -1.61
GPNMB-205ENST00000463011 SLC4A10Q6U841 1118 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 KSR2Q6VAB6 950 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 KIF18BQ86Y91 864 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 TMEM130Q8N3G9 435 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 SMC1BQ8NDV3 1235 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 NEDD1Q8NHV4 660 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 NPLOC4Q8TAT6 608 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 JPH3Q8WXH2 748 aaPredicted RBP5.02□□□□□ -1.61
GPNMB-205ENST00000463011 COPS5Q92905 334 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 IRF7Q92985 503 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 ORAI3Q9BRQ5 295 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 ASCC2Q9H1I8 757 aaPredicted RBP5.02□□□□□ -1.61
GPNMB-205ENST00000463011 ARNT2Q9HBZ2 717 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 VTA1Q9NP79 307 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 THG1LQ9NWX6 298 aaKnown RBP5.02□□□□□ -1.61
GPNMB-205ENST00000463011 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 RNF112Q9ULX5 631 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 ZKSCAN5Q9Y2L8 839 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms