RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
LIMS1-211ENST00000462817 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
LIMS1-211ENST00000462817 RTP1P59025 263 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
LIMS1-211ENST00000462817 CCDC144BQ3MJ40 725 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 USH1GQ495M9 461 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 SLC39A5Q6ZMH5 540 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 CYB5R4Q7L1T6 521 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 MPHOSPH6Q99547 160 aaKnown RBP18.12■□□□□ 0.49
LIMS1-211ENST00000462817 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
LIMS1-211ENST00000462817 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
LIMS1-211ENST00000462817 E7EWF7 191 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 NFIBO00712 420 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 SLC34A2O95436 690 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 NEFLP07196 543 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 CALML3P27482 149 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 CDC37Q16543 378 aaPredicted RBP18.11■□□□□ 0.49
LIMS1-211ENST00000462817 CASC1Q6TDU7 716 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 ADGRF4Q8IZF3 695 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 MAP4K1Q92918 833 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 FGD4Q96M96 766 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 LBHD1Q9BQE6 289 aaPredicted RBP18.11■□□□□ 0.49
LIMS1-211ENST00000462817 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 WDR19Q8NEZ3 1342 aa18.11■□□□□ 0.49
LIMS1-211ENST00000462817 SYNRGQ9UMZ2 1314 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
LIMS1-211ENST00000462817 TNFAIP2Q03169 654 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 WTAPQ15007 396 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 EEPD1Q7L9B9 569 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 VTI1AQ96AJ9 217 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 TSEN34Q9BSV6 310 aaKnown RBP18.1■□□□□ 0.49
LIMS1-211ENST00000462817 ANO2Q9NQ90 1003 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
LIMS1-211ENST00000462817 TRIOBPQ9H2D6 2365 aa18.09■□□□□ 0.49
LIMS1-211ENST00000462817 B4DLN1 442 aa18.09■□□□□ 0.49
LIMS1-211ENST00000462817 MAGEA10P43363 369 aaPredicted RBP18.09■□□□□ 0.49
LIMS1-211ENST00000462817 MRPL12P52815 198 aaKnown RBP18.09■□□□□ 0.49
LIMS1-211ENST00000462817 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
LIMS1-211ENST00000462817 ESYT1Q9BSJ8 1104 aa18.09■□□□□ 0.49
LIMS1-211ENST00000462817 PRDM5Q9NQX1 630 aaPredicted RBP18.09■□□□□ 0.49
LIMS1-211ENST00000462817 MCM3APO60318 1980 aa18.09■□□□□ 0.49
LIMS1-211ENST00000462817 ABCB11O95342 1321 aa18.08■□□□□ 0.49
LIMS1-211ENST00000462817 A0A1W2PQ45 241 aaPredicted RBP18.08■□□□□ 0.48
LIMS1-211ENST00000462817 A0A1W2PQY0 241 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 ADAMTS4O75173 837 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 SEC23AQ15436 765 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 KCNA10Q16322 511 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 TRIM60Q495X7 471 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 TMEM67Q5HYA8 995 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 GNASQ5JWF2 1037 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 SLC30A10Q6XR72 485 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 CHST3Q7LGC8 479 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 SKAP1Q86WV1 359 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 FBXO11Q86XK2 927 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 PCSK9Q8NBP7 692 aaKnown RBP18.08■□□□□ 0.48
LIMS1-211ENST00000462817 CLEC4DQ8WXI8 215 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 PURBQ96QR8 312 aaKnown RBP18.08■□□□□ 0.48
LIMS1-211ENST00000462817 UBE2OQ9C0C9 1292 aaKnown RBP18.08■□□□□ 0.48
LIMS1-211ENST00000462817 AP5M1Q9H0R1 490 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.48
LIMS1-211ENST00000462817 A0A1W2PPC1 479 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 MOXD2PA6NHM9 499 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 BMP8BP34820 402 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 ACLYP53396 1101 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 RPS6P62753 249 aaKnown RBP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 MDM2Q00987 491 aaPredicted RBP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 QRICH1Q2TAL8 776 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 CATIPQ7Z7H3 387 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 FBXO16Q8IX29 292 aaPredicted RBP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 GLT1D1Q96MS3 346 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 GDF15Q99988 308 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 VTA1Q9NP79 307 aa18.07■□□□□ 0.48
LIMS1-211ENST00000462817 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
LIMS1-211ENST00000462817 LOC102724159A0A0B4J2E5 919 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 GJA9P57773 515 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 PDE4DQ08499 809 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 PWP2Q15269 919 aaKnown RBP18.06■□□□□ 0.48
LIMS1-211ENST00000462817 STAG2Q8N3U4 1231 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 KLHDC9Q8NEP7 349 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 LSG1Q9H089 658 aaKnown RBP18.06■□□□□ 0.48
LIMS1-211ENST00000462817 PRO3102Q9H379 93 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 TAF6LQ9Y6J9 622 aa18.06■□□□□ 0.48
LIMS1-211ENST00000462817 DDX49Q9Y6V7 483 aaKnown RBP18.06■□□□□ 0.48
LIMS1-211ENST00000462817 ASTN1O14525 1302 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.05■□□□□ 0.48
LIMS1-211ENST00000462817 DYNC1LI2O43237 492 aaPredicted RBP18.05■□□□□ 0.48
LIMS1-211ENST00000462817 ZEB2O60315 1214 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 PQBP1O60828 265 aaKnown RBP18.05■□□□□ 0.48
LIMS1-211ENST00000462817 CST5P28325 142 aaPredicted RBP18.05■□□□□ 0.48
LIMS1-211ENST00000462817 SNX17Q15036 470 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 C1orf53Q5VUE5 145 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms