RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 WDR78Q5VTH9 848 aa17.33■□□□□ 0.37
SMC4-204ENST00000462787 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.37
SMC4-204ENST00000462787 LRRC8CQ8TDW0 803 aa17.33■□□□□ 0.37
SMC4-204ENST00000462787 EXOC5O00471 708 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 PDE8AO60658 829 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 KRT5P13647 590 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 IFNAR1P17181 557 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 CORO7P57737 925 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.36
SMC4-204ENST00000462787 TBC1D7Q9P0N9 293 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 LAD1O00515 517 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 DDAH1O94760 285 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 H2AFXP16104 143 aaPredicted RBP17.33■□□□□ 0.36
SMC4-204ENST00000462787 PDE6AP16499 860 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.36
SMC4-204ENST00000462787 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.33■□□□□ 0.36
SMC4-204ENST00000462787 DNM3Q9UQ16 869 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.36
SMC4-204ENST00000462787 GMNCA6NCL1 334 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 C10orf76Q5T2E6 689 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 PLAAQ9Y263 795 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 TNKSO95271 1327 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 PLA2R1Q13018 1463 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 EIF4A3P38919 411 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 NLRP14Q86W24 1093 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 RPUSD2Q8IZ73 545 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 ABCC12Q96J65 1359 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 MEFVO15553 781 aaPredicted RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 PSMC4P43686 418 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 CCDC14Q49A88 953 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 ARHGEF18Q6ZSZ5 1173 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 TBC1D1Q86TI0 1168 aaPredicted RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 ARMC2Q8NEN0 867 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 UHMK1Q8TAS1 419 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 NEK9Q8TD19 979 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 AGTPBP1Q9UPW5 1226 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 PFDN1O60925 122 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 COBLO75128 1261 aa17.32■□□□□ 0.36
SMC4-204ENST00000462787 METTL14Q9HCE5 456 aaKnown RBP17.32■□□□□ 0.36
SMC4-204ENST00000462787 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.364e-8■■■■■ 116
SMC4-204ENST00000462787 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 ABCB4P21439 1286 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 KIF11P52732 1056 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 WDR44Q5JSH3 913 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 HNRNPLLQ8WVV9 542 aaKnown RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 SLC39A2Q9NP94 309 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 SUFUQ9UMX1 484 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 PLA2G4AP47712 749 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 TRPC3Q13507 836 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 SH2B2O14492 632 aaPredicted RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 HSPA6P17066 643 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 ADCY8P40145 1251 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 CFAP61Q8NHU2 1237 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 TUBB6Q9BUF5 446 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 GEMIN8Q9NWZ8 242 aaKnown RBP17.31■□□□□ 0.36
SMC4-204ENST00000462787 KCNQ3O43525 872 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 PTPREP23469 700 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 CCNE1P24864 410 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
SMC4-204ENST00000462787 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■■■ 83.2
SMC4-204ENST00000462787 PHBP35232 272 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 PLS1Q14651 629 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 BAG2O95816 211 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
SMC4-204ENST00000462787 C6orf118Q5T5N4 469 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 AK8Q96MA6 479 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 CCDC188H7C350 402 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 ANKRD35Q8N283 1001 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 CIAO1O76071 339 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 TSGA10IPQ3SY00 556 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 TEX11Q8IYF3 940 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 RILPQ96NA2 401 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 THEGQ9P2T0 379 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 FHOD1Q9Y613 1164 aa17.3■□□□□ 0.36
SMC4-204ENST00000462787 M0R2C6 588 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 MAN1A1P33908 653 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 TPD52P55327 224 aaPredicted RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 IRX1P78414 480 aaPredicted RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms