RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 GPHNQ9NQX3 736 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-216ENST00000462421 NAP1L2Q9ULW6 460 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-216ENST00000462421 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 ZNF236Q9UL36 1845 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 LOC102724159A0A0B4J2E5 919 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 H0YGN5 161 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 CYP21A2P08686 494 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 C6orf222P0C671 652 aaPredicted RBP10.4□□□□□ -0.74
DDX39B-216ENST00000462421 NOVP48745 357 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 PTH1RQ03431 593 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 PWP2Q15269 919 aaKnown RBP10.4□□□□□ -0.74
DDX39B-216ENST00000462421 PRAMEF19Q5SWL8 479 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
DDX39B-216ENST00000462421 TTBK2Q6IQ55 1244 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 DIS3LQ8TF46 1054 aaKnown RBP10.4□□□□□ -0.74
DDX39B-216ENST00000462421 MAP4K1Q92918 833 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 GLT1D1Q96MS3 346 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 LZTS2Q9BRK4 669 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 MTA3Q9BTC8 594 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 UBA5Q9GZZ9 404 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 MAF1Q9H063 256 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 A1CFQ9NQ94 594 aaKnown RBP10.4□□□□□ -0.74
DDX39B-216ENST00000462421 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 SLC12A7Q9Y666 1083 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 A0A0G2JMZ2 1700 aa10.4□□□□□ -0.74
DDX39B-216ENST00000462421 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 MYH4Q9Y623 1939 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 MOXD2PA6NHM9 499 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 PRC1O43663 620 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 DUSP11O75319 330 aaKnown RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 DDAH1O94760 285 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 ATN1P54259 1190 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 TNFAIP2Q03169 654 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 MAMDC4Q6UXC1 1216 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 CCDC144CPQ8IYA2 1237 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 ADGRF4Q8IZF3 695 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 DNERQ8NFT8 737 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 ANKS1AQ92625 1134 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 RRP36Q96EU6 259 aaKnown RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 TSEN34Q9BSV6 310 aaKnown RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 STARD7Q9NQZ5 370 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 CYP39A1Q9NYL5 469 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 PLXNB2O15031 1838 aa10.39□□□□□ -0.75
DDX39B-216ENST00000462421 GREB1LQ9C091 1923 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-216ENST00000462421 DCDC2CA8MYV0 355 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 ZBTB5O15062 677 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 PSMA5P28066 241 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 BAATQ14032 418 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-216ENST00000462421 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 LRRC41Q15345 812 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 ARHGEF16Q5VV41 709 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 NSUN6Q8TEA1 469 aaKnown RBP10.38□□□□□ -0.75
DDX39B-216ENST00000462421 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
DDX39B-216ENST00000462421 ZMYND8Q9ULU4 1186 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-216ENST00000462421 DNAJC25-GNG10A0A024R161 153 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 SLC27A2O14975 620 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 NKRFO15226 690 aaKnown RBP eCLIP10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CABYRO75952 493 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 PGK1P00558 417 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CFBP00751 764 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 ADCYAP1R1P41586 468 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CPT1AP50416 773 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 GRM4Q14833 912 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CREB3L3Q68CJ9 461 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 EEPD1Q7L9B9 569 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 CHST3Q7LGC8 479 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 TLK2Q86UE8 772 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 SAMD3Q8N6K7 520 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 FERMT2Q96AC1 680 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 NEK1Q96PY6 1258 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
DDX39B-216ENST00000462421 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
DDX39B-216ENST00000462421 KIAA0100Q14667 2235 aaKnown RBP10.37□□□□□ -0.75
DDX39B-216ENST00000462421 ZNF536O15090 1300 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 NFIBO00712 420 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 ZNF865P0CJ78 1059 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 RTP1P59025 263 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 RPS6P62753 249 aaKnown RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 AKAP17AQ02040 695 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms