RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ACLYP53396 1101 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 TLE2Q04725 743 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 KCNA10Q16322 511 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 LRIT3Q3SXY7 679 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 ZSWIM5Q9P217 1185 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 PNMA2Q9UL42 364 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 ASTN1O14525 1302 aa22.24■■□□□ 1.15
VARS-220ENST00000461874 MYADML2A6NDP7 307 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 MOXD2PA6NHM9 499 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 CST5P28325 142 aaPredicted RBP22.23■■□□□ 1.15
VARS-220ENST00000461874 GJA9P57773 515 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 GPATCH4Q5T3I0 446 aaKnown RBP22.23■■□□□ 1.15
VARS-220ENST00000461874 ZSCAN10Q96SZ4 725 aaPredicted RBP22.23■■□□□ 1.15
VARS-220ENST00000461874 KRT23Q9C075 422 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 UPF3AQ9H1J1 476 aaKnown RBP22.23■■□□□ 1.15
VARS-220ENST00000461874 PDLIM7Q9NR12 457 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 RAD50Q92878 1312 aa22.23■■□□□ 1.15
VARS-220ENST00000461874 NFIBO00712 420 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 IRX5P78411 483 aaPredicted RBP22.22■■□□□ 1.15
VARS-220ENST00000461874 BAATQ14032 418 aaPredicted RBP22.22■■□□□ 1.15
VARS-220ENST00000461874 ENAHQ8N8S7 591 aaPredicted RBP22.22■■□□□ 1.15
VARS-220ENST00000461874 PNMA1Q8ND90 353 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 NUP133Q8WUM0 1156 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 KAT14Q9H8E8 782 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 CNNM2Q9H8M5 875 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 SPC25Q9HBM1 224 aa22.22■■□□□ 1.15
VARS-220ENST00000461874 PRDM5Q9NQX1 630 aaPredicted RBP22.22■■□□□ 1.15
VARS-220ENST00000461874 MCM3APO60318 1980 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 TRIM43BA6NCK2 446 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
VARS-220ENST00000461874 CHMLP26374 656 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 SH3RF1Q7Z6J0 888 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 PCSK9Q8NBP7 692 aaKnown RBP22.21■■□□□ 1.15
VARS-220ENST00000461874 MORC4Q8TE76 937 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 RUFY2Q8WXA3 655 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 CLEC4DQ8WXI8 215 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 TRIM43Q96BQ3 446 aaPredicted RBP22.21■■□□□ 1.15
VARS-220ENST00000461874 PURBQ96QR8 312 aaKnown RBP22.21■■□□□ 1.15
VARS-220ENST00000461874 STARD7Q9NQZ5 370 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 DDX49Q9Y6V7 483 aaKnown RBP22.21■■□□□ 1.15
VARS-220ENST00000461874 WDR19Q8NEZ3 1342 aa22.21■■□□□ 1.15
VARS-220ENST00000461874 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
VARS-220ENST00000461874 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.2■■□□□ 1.14
VARS-220ENST00000461874 NKX3-2P78367 333 aa22.2■■□□□ 1.14
VARS-220ENST00000461874 TNFAIP2Q03169 654 aa22.2■■□□□ 1.14
VARS-220ENST00000461874 UBA5Q9GZZ9 404 aa22.2■■□□□ 1.14
VARS-220ENST00000461874 CTAGE5O15320 804 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 GNASQ5JWF2 1037 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 GPR153Q6NV75 609 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 TOX2Q96NM4 488 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 UBAC1Q9BSL1 405 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 CPVLQ9H3G5 476 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 ADD3Q9UEY8 706 aaKnown RBP22.19■■□□□ 1.14
VARS-220ENST00000461874 GNEQ9Y223 722 aaKnown RBP22.19■■□□□ 1.14
VARS-220ENST00000461874 TNKSO95271 1327 aa22.19■■□□□ 1.14
VARS-220ENST00000461874 ELP1O95163 1332 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 PQBP1O60828 265 aaKnown RBP22.18■■□□□ 1.14
VARS-220ENST00000461874 ASGR1P07306 291 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 CLTBP09497 229 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 IQSEC1Q6DN90 963 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 TAPT1Q6NXT6 567 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 NOL8Q76FK4 1167 aaKnown RBP22.18■■□□□ 1.14
VARS-220ENST00000461874 EEPD1Q7L9B9 569 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 ANKRD33Q7Z3H0 272 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 FBXO16Q8IX29 292 aaPredicted RBP22.18■■□□□ 1.14
VARS-220ENST00000461874 BADQ92934 168 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 GLT1D1Q96MS3 346 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 VTA1Q9NP79 307 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 PDGFCQ9NRA1 345 aa22.18■■□□□ 1.14
VARS-220ENST00000461874 LOC102724159A0A0B4J2E5 919 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 SMPD1P17405 629 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 ALDH5A1P51649 535 aaPredicted RBP22.17■■□□□ 1.14
VARS-220ENST00000461874 PTH1RQ03431 593 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 PWP2Q15269 919 aaKnown RBP22.17■■□□□ 1.14
VARS-220ENST00000461874 ASPRV1Q53RT3 343 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 SLC30A10Q6XR72 485 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
VARS-220ENST00000461874 KIAA0355O15063 1070 aa22.16■■□□□ 1.14
VARS-220ENST00000461874 CALML3P27482 149 aa22.16■■□□□ 1.14
VARS-220ENST00000461874 TLK2Q86UE8 772 aa22.16■■□□□ 1.14
VARS-220ENST00000461874 U3KPZ7 1027 aaPredicted RBP22.16■■□□□ 1.14
VARS-220ENST00000461874 DCDC2CA8MYV0 355 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 SGSM2O43147 1006 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 CYP21A2P08686 494 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 PARP1P09874 1014 aaKnown RBP22.15■■□□□ 1.14
VARS-220ENST00000461874 ITGB8P26012 769 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 CDK7P50613 346 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 RPS6P62753 249 aaKnown RBP22.15■■□□□ 1.14
VARS-220ENST00000461874 BEX3Q00994 111 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 FAAP100Q0VG06 881 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 SEC23AQ15436 765 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 CDC37Q16543 378 aaPredicted RBP22.15■■□□□ 1.14
VARS-220ENST00000461874 USH1GQ495M9 461 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 IFIT1BQ5T764 474 aaKnown RBP22.15■■□□□ 1.14
VARS-220ENST00000461874 CYB5R4Q7L1T6 521 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 ADGRF4Q8IZF3 695 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 RGS22Q8NE09 1264 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 VTI1AQ96AJ9 217 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms