RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
SPTA1-202ENST00000461624 RNF43Q68DV7 783 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-202ENST00000461624 ZDHHC13Q8IUH4 622 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 CD99L2Q8TCZ2 262 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 KRTAP4-12Q9BQ66 201 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 DBNDD2Q9BQY9 259 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 RNF208Q9H0X6 261 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 ALPK3Q96L96 1907 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 DDX3YO15523 660 aaKnown RBP7.1□□□□□ -1.27
SPTA1-202ENST00000461624 TGFB1P01137 390 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 HMOX1P09601 288 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 GRIK1P39086 918 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 USP5P45974 858 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 TEFQ10587 303 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 SLC10A5Q5PT55 438 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 LDLRAD1Q5T700 205 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 SUSD4Q5VX71 490 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 CLEC10AQ8IUN9 316 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPTA1-202ENST00000461624 FAM20CQ8IXL6 584 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 ZNF34Q8IZ26 560 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 ERO1AQ96HE7 468 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 GMLQ99445 158 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 COL3A1P02461 1466 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-202ENST00000461624 CHD9Q3L8U1 2897 aa7.1□□□□□ -1.27
SPTA1-202ENST00000461624 MAP3K15Q6ZN16 1313 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 WTIPA6NIX2 430 aaPredicted RBP7.09□□□□□ -1.27
SPTA1-202ENST00000461624 SART1O43290 800 aaKnown RBP7.09□□□□□ -1.27
SPTA1-202ENST00000461624 BBOX1O75936 387 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 VIL1P09327 827 aaKnown RBP7.09□□□□□ -1.27
SPTA1-202ENST00000461624 ARL4DP49703 201 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 PTPN12Q05209 780 aaKnown RBP7.09□□□□□ -1.27
SPTA1-202ENST00000461624 Q7L0L9 218 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 TRIM42Q8IWZ5 723 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 TMEM102Q8N9M5 508 aaPredicted RBP7.09□□□□□ -1.27
SPTA1-202ENST00000461624 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 DBNDD1Q9H9R9 158 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 MTMR10Q9NXD2 777 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 PTCH2Q9Y6C5 1203 aa7.09□□□□□ -1.27
SPTA1-202ENST00000461624 SOWAHDA6NJG2 315 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 BTBD11A6QL63 1104 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 GNAT3A8MTJ3 354 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 NDUFB5O43674 189 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 SNRPA1P09661 255 aaKnown RBP7.08□□□□□ -1.28
SPTA1-202ENST00000461624 ACPPP15309 386 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 GPTP24298 496 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 EHHADHQ08426 723 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 CRHR2Q13324 411 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 C8orf34Q49A92 452 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 SLC9C1Q4G0N8 1177 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 PRAMEF18Q5VWM3 479 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 TTLL7Q6ZT98 887 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 DEFB123Q8N688 67 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 FAM83CQ9BQN1 747 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 RUSC1Q9BVN2 902 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-202ENST00000461624 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
SPTA1-202ENST00000461624 SCAF8Q9UPN6 1271 aaKnown RBP7.08□□□□□ -1.28
SPTA1-202ENST00000461624 REV3LO60673 3130 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 HMX2A2RU54 273 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 MEGF11A6BM72 1044 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 MANSC4A6NHS7 340 aaPredicted RBP7.07□□□□□ -1.28
SPTA1-202ENST00000461624 ECE2O60344 883 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 PREPP48147 710 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 NLRP12P59046 1061 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 C19orf57Q0VDD7 668 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 SNX29Q8TEQ0 813 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 POLLQ9UGP5 575 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
SPTA1-202ENST00000461624 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
SPTA1-202ENST00000461624 OTOFQ9HC10 1997 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 MED26O95402 600 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 ZBTB48P10074 688 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-202ENST00000461624 BMP3P12645 472 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 EDN3P14138 238 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 SPINK2P20155 84 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 PLA2G5P39877 138 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 INHBEP58166 350 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 SP3Q02447 781 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 GRAPQ13588 217 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 SLC4A8Q2Y0W8 1093 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 BEND4Q6ZU67 534 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 GRAPLQ8TC17 118 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-202ENST00000461624 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 BSNDQ8WZ55 320 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 DPF3Q92784 378 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 OSMRQ99650 979 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 PTPN18Q99952 460 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 SOX17Q9H6I2 414 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-202ENST00000461624 RAPGEFL1Q9UHV5 662 aa7.06□□□□□ -1.28
SPTA1-202ENST00000461624 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SPTA1-202ENST00000461624 A6NHS1 94 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms