RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
SYN3-206ENST00000461446 ATP2A1O14983 1001 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 TAL1P17542 331 aaPredicted RBP11.82□□□□□ -0.52
SYN3-206ENST00000461446 SLC16A2P36021 539 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 NEK4P51957 841 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 EVCP57679 992 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
SYN3-206ENST00000461446 GRM4Q14833 912 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 NUP133Q8WUM0 1156 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 AGBL1Q96MI9 1066 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 HTATIP2Q9BUP3 242 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 HOMER2Q9NSB8 354 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 SLC5A4Q9NY91 659 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
SYN3-206ENST00000461446 MAD2L2Q9UI95 211 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 PRR12Q9ULL5 1215 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 ZNF536O15090 1300 aa11.82□□□□□ -0.52
SYN3-206ENST00000461446 ZBTB43O43298 467 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 FDX1P10109 184 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 COPB2P35606 906 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
SYN3-206ENST00000461446 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 C11orf49Q9H6J7 331 aa11.81□□□□□ -0.52
SYN3-206ENST00000461446 DNAJC25-GNG10A0A024R161 153 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 EVI5O60447 810 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 CAPN2P17655 700 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 RXRAP19793 462 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 KIF5BP33176 963 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 RCAN1P53805 252 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 OAZ1P54368 228 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 SYDE2Q5VT97 1194 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 TINF2Q9BSI4 451 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 PCDH10Q9P2E7 1040 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 PFASO15067 1338 aa11.8□□□□□ -0.52
SYN3-206ENST00000461446 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 PLXNA1Q9UIW2 1896 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 SEPT4O43236 478 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 COL6A1P12109 1028 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 ALAS1P13196 640 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 PDIA3P30101 505 aaKnown RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 GNAQP50148 359 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 AK2P54819 239 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 CNTN2Q02246 1040 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 RABEP1Q15276 862 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 CHST13Q8NET6 341 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 ZNF274Q96GC6 653 aaPredicted RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 FGD4Q96M96 766 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
SYN3-206ENST00000461446 ALPK3Q96L96 1907 aa11.79□□□□□ -0.52
SYN3-206ENST00000461446 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 GOLGA8BA8MQT2 603 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 MSCO60682 206 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 SNAI1O95863 264 aaPredicted RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 METAP2P50579 478 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYN3-206ENST00000461446 RTN1Q16799 776 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 SLC35G1Q2M3R5 365 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 MUM1L1Q5H9M0 696 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 GJC2Q5T442 439 aaPredicted RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 TRERF1Q96PN7 1200 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 LZTS2Q9BRK4 669 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 LARP6Q9BRS8 491 aaKnown RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
SYN3-206ENST00000461446 FBXO40Q9UH90 709 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 NR2E3Q9Y5X4 410 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms