RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NFKB2Q00653 900 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 AMPD3Q01432 767 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 PRSS53Q2L4Q9 553 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 C22orf34Q6ZV56 151 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 KRT26Q7Z3Y9 468 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 BRAPQ7Z569 592 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 LRRTM3Q86VH5 581 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 AHI1Q8N157 1196 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 ZNF655Q8N720 491 aaPredicted RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 TMEM145Q8NBT3 493 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 MAGEB10Q96LZ2 347 aaPredicted RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 HEXIM2Q96MH2 286 aaKnown RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 METTL22Q9BUU2 404 aaPredicted RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 OSBPL1AQ9BXW6 950 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 SLC52A2Q9HAB3 445 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 LRRC4CQ9HCJ2 640 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 BACE2Q9Y5Z0 518 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 CAPN6Q9Y6Q1 641 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 C2orf71A6NGG8 1288 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 AQP7O14520 342 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 MEFVO15553 781 aaPredicted RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 F13BP05160 661 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 GSTM1P09488 218 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 FOSL1P15407 271 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 NAT1P18440 290 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 HOXA10P31260 410 aaPredicted RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 PCBP3P57721 371 aaKnown RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 CBLL1Q75N03 491 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 MAMDC2Q7Z304 686 aaPredicted RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 MTDHQ86UE4 582 aaKnown RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 THNSL2Q86YJ6 484 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 PPIL6Q8IXY8 311 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 PPM1KQ8N3J5 372 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 UBR7Q8N806 425 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 DAGLBQ8NCG7 672 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 ATL2Q8NHH9 583 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 DCAF4Q8WV16 495 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 LEO1Q8WVC0 666 aaPredicted RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 HDAC8Q9BY41 377 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 GPR62Q9BZJ7 368 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 METTL14Q9HCE5 456 aaKnown RBP4.38□□□□□ -1.71
VCL-203ENST00000461383 ZSWIM5Q9P217 1185 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 MAPRE3Q9UPY8 281 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 RNF114Q9Y508 228 aa4.38□□□□□ -1.71
VCL-203ENST00000461383 WDR64B1ANS9 1081 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 B4E1Z4 1266 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 H3BS24 57 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 AURKAO14965 403 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 SCG5P05408 212 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 SYPP08247 313 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 C6orf222P0C671 652 aaPredicted RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 SDSP20132 328 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 LTKP29376 864 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 BMP8BP34820 402 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 IGFALSP35858 605 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 TRIM61Q5EBN2 209 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 NFXL1Q6ZNB6 911 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 UBE2R2Q712K3 238 aaPredicted RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 DDX46Q7L014 1031 aaKnown RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 VSIG10LQ86VR7 867 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 NAT16Q8N8M0 369 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 FAM181AQ8N9Y4 354 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 PRPF38AQ8NAV1 312 aaKnown RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 SLC7A14Q8TBB6 771 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 GATA6Q92908 595 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 SYTL4Q96C24 671 aaPredicted RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 CEP89Q96ST8 783 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 TARS2Q9BW92 718 aaKnown RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 CDADC1Q9BWV3 514 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 GPRC5CQ9NQ84 441 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 ATP8A1Q9Y2Q0 1164 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 TRAF6Q9Y4K3 522 aa4.37□□□□□ -1.71
VCL-203ENST00000461383 TNPO3Q9Y5L0 923 aaKnown RBP4.37□□□□□ -1.71
VCL-203ENST00000461383 A0A087X0B3 334 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 RBAK-RBAKDNI3L0D1 243 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 KPNA6O60684 536 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 FKTNO75072 461 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 DNAJC8O75937 253 aaPredicted RBP4.36□□□□□ -1.71
VCL-203ENST00000461383 ASLP04424 464 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 CAPNS1P04632 268 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 CEACAM5P06731 702 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 THBDP07204 575 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 IFNGR1P15260 489 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 VAV1P15498 845 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 TPP2P29144 1249 aaPredicted RBP4.36□□□□□ -1.71
VCL-203ENST00000461383 CTSKP43235 329 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 GUCY1A3Q02108 690 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 NTRK3Q16288 839 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 CFAP100Q494V2 611 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 SLC35F1Q5T1Q4 408 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 EEF1DP3Q658K8 133 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 FGD2Q7Z6J4 655 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 FERMT3Q86UX7 667 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 TSPYL5Q86VY4 417 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms