RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 MNS1Q8NEH6 495 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 RAB34Q9BZG1 259 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 EHD4Q9H223 541 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 ABHD10Q9NUJ1 306 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
DHFR2-203ENST00000461173 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 ABCB11O95342 1321 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 AFF2P51816 1311 aa11.09□□□□□ -0.63
DHFR2-203ENST00000461173 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 KIF5CO60282 957 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 URI1O94763 535 aaPredicted RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 TTLL1O95922 423 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 CCNE1P24864 410 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 CASP14P31944 242 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 DNM2P50570 870 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 FKBP1AP62942 108 aaKnown RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 RAD9BQ6WBX8 426 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 STAMQ92783 540 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 GPR101Q96P66 508 aaPredicted RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 NAP1L4Q99733 375 aaKnown RBP11.08□□□□□ -0.64
DHFR2-203ENST00000461173 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 GDAQ9Y2T3 454 aa11.08□□□□□ -0.64
DHFR2-203ENST00000461173 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 CCNT1O60563 726 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 NPR1P16066 1061 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 PLCG1P19174 1290 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 GABPB1Q06547 395 aaPredicted RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 TXNRD1Q16881 649 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 ERCC6LQ2NKX8 1250 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 FIGNQ5HY92 759 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 MEX3CQ5U5Q3 659 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 JAKMIP3Q5VZ66 844 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 KRT222Q8N1A0 295 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 RABGGTAQ92696 567 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 CALML4Q96GE6 196 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 WDR24Q96S15 920 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 GOLGA8HP0CJ92 632 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 GCFC2P16383 781 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 ADCY7P51828 1080 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 ZNF543Q08ER8 600 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 SEPT2Q15019 361 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 ARHGAP29Q52LW3 1261 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 RSRC2Q7L4I2 434 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 OR8K1Q8NGG5 319 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 P2RX5Q93086 422 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 PIGSQ96S52 555 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
DHFR2-203ENST00000461173 RIC8AQ9NPQ8 531 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 SERPINB13Q9UIV8 391 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 CAPN11Q9UMQ6 739 aa11.07□□□□□ -0.64
DHFR2-203ENST00000461173 SRGNP10124 158 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 ZSCAN20P17040 1043 aaPredicted RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 CDC25AP30304 524 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 CCT6AP40227 531 aaKnown RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 GTF2IP78347 998 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 HDLBPQ00341 1268 aaKnown RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 CDK17Q00537 523 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 UBXN1Q04323 297 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 PTPN21Q16825 1174 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 ZSCAN29Q8IWY8 852 aaPredicted RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 MMTAG2Q9BU76 263 aaKnown RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 ZC3H12CQ9C0D7 883 aaKnown RBP11.06□□□□□ -0.64
DHFR2-203ENST00000461173 EXOC1Q9NV70 894 aa11.06□□□□□ -0.64
DHFR2-203ENST00000461173 PP2D1A8MPX8 630 aa11.05□□□□□ -0.64
DHFR2-203ENST00000461173 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
DHFR2-203ENST00000461173 FGFR1OPO95684 399 aaKnown RBP11.05□□□□□ -0.64
DHFR2-203ENST00000461173 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
DHFR2-203ENST00000461173 TUBBP07437 444 aa11.05□□□□□ -0.64
DHFR2-203ENST00000461173 KRT9P35527 623 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms