RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 NR2E3Q9Y5X4 410 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 SCN9AQ15858 1988 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 LAMA2P24043 3122 aaKnown RBP5.85□□□□□ -1.47
CNN3-204ENST00000461018 KIF7Q2M1P5 1343 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 IRS2Q9Y4H2 1338 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 H3BRJ5 948 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 NDUFB5O43674 189 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 ARL4DP49703 201 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 PDE4CQ08493 712 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 MTHFSDQ2M296 383 aaKnown RBP5.85□□□□□ -1.47
CNN3-204ENST00000461018 SUSD4Q5VX71 490 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 DPP8Q6V1X1 898 aaPredicted RBP5.85□□□□□ -1.47
CNN3-204ENST00000461018 DZIP1LQ8IYY4 767 aaKnown RBP5.85□□□□□ -1.47
CNN3-204ENST00000461018 GJD3Q8N144 294 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 TMEM130Q8N3G9 435 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 UBASH3BQ8TF42 649 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 VPS33BQ9H267 617 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 ZFYVE28Q9HCC9 887 aa5.85□□□□□ -1.47
CNN3-204ENST00000461018 OAS3Q9Y6K5 1087 aaKnown RBP5.85□□□□□ -1.47
CNN3-204ENST00000461018 ARID1BQ8NFD5 2236 aaPredicted RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 DUOX1Q9NRD9 1551 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 RIC1Q4ADV7 1423 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 ABCC4O15439 1325 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 UBN2Q6ZU65 1347 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 METTL12A8MUP2 240 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 GSC2O15499 205 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 SYN1P17600 705 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 GPTP24298 496 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 CTGFP29279 349 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 BMP8BP34820 402 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 GP2P55259 537 aaKnown RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 IKBKEQ14164 716 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 NBPF9Q3BBW0 867 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 LRIT3Q3SXY7 679 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 LDLRAD1Q5T700 205 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 HGSNATQ68CP4 663 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 ZNF790Q6PG37 636 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 TMEM102Q8N9M5 508 aaPredicted RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 IL17REQ8NFR9 667 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 CCER1Q8TC90 406 aaPredicted RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 NXPE3Q969Y0 559 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 PCGF6Q9BYE7 350 aa5.84□□□□□ -1.47
CNN3-204ENST00000461018 BIN2Q9UBW5 565 aaPredicted RBP5.84□□□□□ -1.47
CNN3-204ENST00000461018 SART1O43290 800 aaKnown RBP5.83□□□□□ -1.48
CNN3-204ENST00000461018 ZNF280AP59817 542 aaPredicted RBP5.83□□□□□ -1.48
CNN3-204ENST00000461018 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 TTC5Q8N0Z6 440 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 SUPT20HQ8NEM7 779 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 MAFAQ8NHW3 353 aaPredicted RBP5.83□□□□□ -1.48
CNN3-204ENST00000461018 FOXD4L4Q8WXT5 416 aaPredicted RBP5.83□□□□□ -1.48
CNN3-204ENST00000461018 BSNDQ8WZ55 320 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 CDX2Q99626 313 aaPredicted RBP5.83□□□□□ -1.48
CNN3-204ENST00000461018 HTATIP2Q9BUP3 242 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 POLLQ9UGP5 575 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 PIEZO1Q92508 2521 aa5.83□□□□□ -1.48
CNN3-204ENST00000461018 COL4A1P02462 1669 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 SYNGAP1Q96PV0 1343 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 MANSC4A6NHS7 340 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 KIAA1324LA8MWY0 1029 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 ECE2O60344 883 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 ADAM11O75078 769 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 VIL1P09327 827 aaKnown RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 HMOX1P09601 288 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 CCL5P13501 91 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 IL13P35225 146 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 MAGEA10P43363 369 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 GJA8P48165 433 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 ARHGAP4P98171 946 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 C19orf57Q0VDD7 668 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 ORC1Q13415 861 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 PEAR1Q5VY43 1037 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 TTLL7Q6ZT98 887 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 KIAA1211Q6ZU35 1233 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 NPM2Q86SE8 214 aaKnown RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 C7orf61Q8IZ16 206 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 USP38Q8NB14 1042 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 UTP4Q969X6 686 aaKnown RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 ZNF428Q96B54 188 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 UBL7Q96S82 380 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 MXD3Q9BW11 206 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 TEX13AQ9BXU3 409 aaPredicted RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 USP26Q9BXU7 913 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 CEP41Q9BYV8 373 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 SOX13Q9UN79 622 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 ANGEL1Q9UNK9 670 aaKnown RBP5.82□□□□□ -1.48
CNN3-204ENST00000461018 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
CNN3-204ENST00000461018 NTSR2O95665 410 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 NEFLP07196 543 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 GJB1P08034 283 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 RPS12P25398 132 aaKnown RBP5.81□□□□□ -1.48
CNN3-204ENST00000461018 TCIRG1Q13488 830 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 ECM1Q16610 540 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 VN1R5Q7Z5H4 357 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 TDHQ8IZJ6 230 aa5.81□□□□□ -1.48
CNN3-204ENST00000461018 MYLIPQ8WY64 445 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms