RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SFRP5Q5T4F7 317 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 MEI1Q5TIA1 1274 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF746Q6NUN9 644 aaPredicted RBP6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 USP48Q86UV5 1035 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 HID1Q8IV36 788 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 MFSD4AQ8N468 514 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 COX4I2Q96KJ9 171 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 GGT7Q9UJ14 662 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 INPP5FQ9Y2H2 1132 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 TACC3Q9Y6A5 838 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 SPATA31A3Q5VYP0 1347 aa6.4□□□□□ -1.39
ATPAF1-203ENST00000460928 A0A1W2PP64 1363 aa6.4□□□□□ -1.39
ATPAF1-203ENST00000460928 PNPLA6Q8IY17 1366 aa6.4□□□□□ -1.39
ATPAF1-203ENST00000460928 CCDC7Q96M83 1385 aa6.4□□□□□ -1.39
ATPAF1-203ENST00000460928 KIF1AQ12756 1690 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 AKAP12Q02952 1782 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 UTRNP46939 3433 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 PRR33A8MZF0 331 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 ATP2B1P20020 1258 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 NKG7Q16617 165 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 THAP5Q7Z6K1 395 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 HSPA12BQ96MM6 686 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 MIPEPQ99797 713 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 PANK3Q9H999 370 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 PCDHGB7Q9Y5F8 929 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 CAPN6Q9Y6Q1 641 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 TTC21BQ7Z4L5 1316 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 POLR3AO14802 1390 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 KTN1Q86UP2 1357 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 USP6P35125 1406 aa6.39□□□□□ -1.39
ATPAF1-203ENST00000460928 FAM155AB1AL88 458 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 CST3P01034 146 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 GDNFP39905 211 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 ST13P50502 369 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 TTBK2Q6IQ55 1244 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 LRRC59Q96AG4 307 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 GMLQ99445 158 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 CARS2Q9HA77 564 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 ATP13A1Q9HD20 1204 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 C19orf73Q9NVV2 129 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 TPX2Q9ULW0 747 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 ST14Q9Y5Y6 855 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 CNTNAP4Q9C0A0 1308 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 CPSF1Q10570 1443 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 TNS3Q68CZ2 1445 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 SSH2Q76I76 1423 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 CAMTA1Q9Y6Y1 1673 aa6.38□□□□□ -1.39
ATPAF1-203ENST00000460928 MON2Q7Z3U7 1717 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 MARF1Q9Y4F3 1742 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 PIK3C2AO00443 1686 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 ALS2Q96Q42 1657 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 NSD3Q9BZ95 1437 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 GLI1P08151 1106 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 ETF1P62495 437 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 DDX10Q13206 875 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 CHRNA2Q15822 529 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 FYB2Q5VWT5 728 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 SPOCD1Q6ZMY3 1216 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 DHX38Q92620 1227 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 CCDC120Q96HB5 630 aa6.37□□□□□ -1.39
ATPAF1-203ENST00000460928 NRKQ7Z2Y5 1582 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 GFRA2O00451 464 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 KIR3DL1P43629 444 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 TNNT2P45379 298 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 ARID5AQ03989 594 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 MLANAQ16655 118 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 PRAMEF13Q5VWM6 474 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 DPH6Q7L8W6 267 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 HDGFL2Q7Z4V5 671 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 VPS37DQ86XT2 251 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 CILP2Q8IUL8 1156 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 KIRREL1Q96J84 757 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 TERF2IPQ9NYB0 399 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 TRPC5Q9UL62 973 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 ABCA3Q99758 1704 aa6.36□□□□□ -1.39
ATPAF1-203ENST00000460928 SBNO1A3KN83 1393 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 ANKRD36BQ8N2N9 1353 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 H3BS24 57 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 FYB1O15117 783 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 TSPAN15O95858 294 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 CYP7A1P22680 504 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 GRK4P32298 578 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 CDK8P49336 464 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 R3HDM1Q15032 1099 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 CDKAL1Q5VV42 579 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 AGMOQ6ZNB7 445 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms