RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 IRF5Q13568 498 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 QRICH1Q2TAL8 776 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 PXYLP1Q8TE99 480 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 RRP36Q96EU6 259 aaKnown RBP26.04■■□□□ 1.76
C9orf3-209ENST00000460573 NUDT12Q9BQG2 462 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 FAM217BQ9NTX9 383 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-209ENST00000460573 RIPK3Q9Y572 518 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 PNMA6FA0A0J9YX94 578 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 INHAP05111 366 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 FCER1AP12319 257 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 ALAS1P13196 640 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 SLC4A3P48751 1232 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 SLC35G1Q2M3R5 365 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 FBXO11Q86XK2 927 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 TRERF1Q96PN7 1200 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 AMNQ9BXJ7 453 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 ACAD9Q9H845 621 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 GJD2Q9UKL4 321 aa26.03■■□□□ 1.76
C9orf3-209ENST00000460573 GJB1P08034 283 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 CDC27P30260 824 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 GRB14Q14449 540 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 KCTD2Q14681 263 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 MORN1Q5T089 497 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 PIGSQ96S52 555 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 MAF1Q9H063 256 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 RNF146Q9NTX7 359 aa26.02■■□□□ 1.76
C9orf3-209ENST00000460573 SEC63Q9UGP8 760 aaKnown RBP26.02■■□□□ 1.76
C9orf3-209ENST00000460573 ABCB11O95342 1321 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 ADD1P35611 737 aaKnown RBP26.01■■□□□ 1.75
C9orf3-209ENST00000460573 HOMER1Q86YM7 354 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 MMP19Q99542 508 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 UNC93B1Q9H1C4 597 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 SLC5A4Q9NY91 659 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 TPCN1Q9ULQ1 816 aa26.01■■□□□ 1.75
C9orf3-209ENST00000460573 ST18O60284 1047 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 RGS2P41220 211 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 GJA8P48165 433 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 MAP2K5Q13163 448 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 CMTR1Q8N1G2 835 aaKnown RBP26■■□□□ 1.75
C9orf3-209ENST00000460573 USP6NLQ92738 828 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 LARP6Q9BRS8 491 aaKnown RBP26■■□□□ 1.75
C9orf3-209ENST00000460573 SLKQ9H2G2 1235 aaPredicted RBP26■■□□□ 1.75
C9orf3-209ENST00000460573 HOMER2Q9NSB8 354 aa26■■□□□ 1.75
C9orf3-209ENST00000460573 PFKFB2O60825 505 aa25.99■■□□□ 1.75
C9orf3-209ENST00000460573 CCT2P78371 535 aaKnown RBP25.99■■□□□ 1.75
C9orf3-209ENST00000460573 FUT2Q10981 343 aa25.99■■□□□ 1.75
C9orf3-209ENST00000460573 CPLX2Q6PUV4 134 aaKnown RBP25.99■■□□□ 1.75
C9orf3-209ENST00000460573 CCDC82Q8N4S0 544 aa25.99■■□□□ 1.75
C9orf3-209ENST00000460573 U2AF1L4Q8WU68 220 aaKnown RBP25.99■■□□□ 1.75
C9orf3-209ENST00000460573 RBM27Q9P2N5 1060 aaKnown RBP25.99■■□□□ 1.75
C9orf3-209ENST00000460573 MRPL11Q9Y3B7 192 aaKnown RBP25.99■■□□□ 1.75
C9orf3-209ENST00000460573 CNTNAP5Q8WYK1 1306 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 TFRCP02786 760 aaKnown RBP25.98■■□□□ 1.75
C9orf3-209ENST00000460573 XRCC5P13010 732 aaKnown RBP25.98■■□□□ 1.75
C9orf3-209ENST00000460573 ADORA2AP29274 412 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 USH1GQ495M9 461 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 ANKRD35Q8N283 1001 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 DPF3Q92784 378 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 LIMCH1Q9UPQ0 1083 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 PCDHA1Q9Y5I3 950 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 ZNF236Q9UL36 1845 aa25.98■■□□□ 1.75
C9orf3-209ENST00000460573 PFASO15067 1338 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 CPLX1O14810 134 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 HMGCRP04035 888 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 HOXC6P09630 235 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 IFNAR1P17181 557 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 STK3Q13188 491 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 DPP9Q86TI2 863 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 TRMT44Q8IYL2 757 aaKnown RBP25.97■■□□□ 1.75
C9orf3-209ENST00000460573 RGS22Q8NE09 1264 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 DDX11Q96FC9 970 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 ZSCAN31Q96LW9 406 aaPredicted RBP25.97■■□□□ 1.75
C9orf3-209ENST00000460573 HTATIP2Q9BUP3 242 aa25.97■■□□□ 1.75
C9orf3-209ENST00000460573 CYP2B6P20813 491 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 NTRK3Q16288 839 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 MUM1L1Q5H9M0 696 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 MCF2L2Q86YR7 1114 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 SHISA4Q96DD7 197 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 DEFB118Q96PH6 123 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 APBA2Q99767 749 aa25.96■■□□□ 1.75
C9orf3-209ENST00000460573 NCOA5Q9HCD5 579 aaKnown RBP25.96■■□□□ 1.75
C9orf3-209ENST00000460573 PLXNB2O15031 1838 aa25.95■■□□□ 1.75
C9orf3-209ENST00000460573 hCG_1984214I3L0E3 225 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 PPP1R11O60927 126 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 FARP2O94887 1054 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 SGPL1O95470 568 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 ME3Q16798 604 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 NOL8Q76FK4 1167 aaKnown RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 SAMD3Q8N6K7 520 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 ZNF713Q8N859 430 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 CLEC4DQ8WXI8 215 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.74
C9orf3-209ENST00000460573 RNF26Q9BY78 433 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 DIS3Q9Y2L1 958 aaKnown RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 V9GY48 417 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-209ENST00000460573 PRPF3O43395 683 aaKnown RBP25.94■■□□□ 1.74
C9orf3-209ENST00000460573 CDKL5O76039 1030 aa25.94■■□□□ 1.74
C9orf3-209ENST00000460573 MCM2P49736 904 aa25.94■■□□□ 1.74
C9orf3-209ENST00000460573 AKAP17AQ02040 695 aaKnown RBP25.94■■□□□ 1.74
C9orf3-209ENST00000460573 SCRN1Q12765 414 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms