RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SCN7AQ01118 1682 aa10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 DDX39AO00148 427 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 WNT10BO00744 389 aa10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 GMPSP49915 693 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 CYP4A11Q02928 519 aa10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 RBM43Q6ZSC3 357 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 VPS16Q9H269 839 aa10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-203ENST00000460110 PLCG1P19174 1290 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 TRAPPC10P48553 1259 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 PLS1Q14651 629 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 KRT79Q5XKE5 535 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 DPF2Q92785 391 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 TIGD1Q96MW7 591 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 A0A1W2PRG0 241 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 RRP1BQ14684 758 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 IL17AQ16552 155 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 AMNQ9BXJ7 453 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 MYOZ2Q9NPC6 264 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 PDE4DQ08499 809 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 NCAPH2Q6IBW4 605 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 ANKRD20A12PQ8NF67 263 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 ANKS1AQ92625 1134 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 TRIM47Q96LD4 638 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 RAB34Q9BZG1 259 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 PCDHA12Q9UN75 941 aa10.54□□□□□ -0.72
NUDCD3-203ENST00000460110 H7C1D1 291 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 MEIS1O00470 390 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 N4BP3O15049 544 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 SORBS3O60504 671 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 SP4Q02446 784 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 TNIP1Q15025 636 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 DLK2Q6UY11 383 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 TBC1D5Q92609 795 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 MTFR1LQ9H019 292 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 EXOC1Q9NV70 894 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 TCEAL9Q9UHQ7 104 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 SLC37A4O43826 429 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 ALAS1P13196 640 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 STAT3P40763 770 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 MLKLQ8NB16 471 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 BMP6P22004 513 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 STAT2P52630 851 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 STIM1Q13586 685 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 FILIP1LQ4L180 1135 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 IDI2Q9BXS1 227 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 SLC39A2Q9NP94 309 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
NUDCD3-203ENST00000460110 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 KCNA3P22001 575 aa10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 LONP1P36776 959 aaKnown RBP10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 MCM6Q14566 821 aa10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 GALNT17Q6IS24 598 aa10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 TAB2Q9NYJ8 693 aa10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 SAMM50Q9Y512 469 aa10.52□□□□□ -0.72
NUDCD3-203ENST00000460110 DUOX1Q9NRD9 1551 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 SNED1Q8TER0 1413 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 TRIM49BA6NDI0 452 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 ENTPD3O75355 529 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 FLOT1O75955 427 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 HDLBPQ00341 1268 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 SPP2Q13103 211 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 LRRC41Q15345 812 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 WDR78Q5VTH9 848 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 FAM151AQ8WW52 585 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 TSC1Q92574 1164 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 RIOX1Q9H6W3 641 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 GOPCQ9HD26 462 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 DISC1Q9NRI5 854 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 SYNRGQ9UMZ2 1314 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 C4AP0C0L4 1744 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 CBFA2T2O43439 604 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 HS1BP3Q53T59 392 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 MAEAQ7L5Y9 396 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 PPFIBP1Q86W92 1011 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 NELFBQ8WX92 580 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 ANO3Q9BYT9 981 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 KCNF1Q9H3M0 494 aa10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 MAGEC2Q9UBF1 373 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-203ENST00000460110 VIL1P09327 827 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms