RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-204ENST00000460035 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 MCOLN1Q9GZU1 580 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 ACAD9Q9H845 621 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
CCDC12-204ENST00000460035 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 LRRC37A2A6NM11 1700 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 CYTH3O43739 400 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 PGK2P07205 417 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 ADORA2AP29274 412 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 CDC27P30260 824 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
CCDC12-204ENST00000460035 RGS2P41220 211 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 GRB14Q14449 540 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 MUM1L1Q5H9M0 696 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 NSMFQ6X4W1 530 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 TMTC3Q6ZXV5 915 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 IL27Q8NEV9 243 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 USP6NLQ92738 828 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 SLKQ9H2G2 1235 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-204ENST00000460035 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-204ENST00000460035 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-204ENST00000460035 TPCN1Q9ULQ1 816 aa12.58□□□□□ -0.4
CCDC12-204ENST00000460035 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-204ENST00000460035 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 ADCY3O60266 1144 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 COBLO75128 1261 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 TRAF1Q13077 416 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 IRF5Q13568 498 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 RABEP1Q15276 862 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
CCDC12-204ENST00000460035 SLC5A4Q9NY91 659 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
CCDC12-204ENST00000460035 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 ABCB11O95342 1321 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
CCDC12-204ENST00000460035 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 CPLX1O14810 134 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 HOXC6P09630 235 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 XRCC5P13010 732 aaKnown RBP12.56□□□□□ -0.4
CCDC12-204ENST00000460035 ELNP15502 786 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 GRK4P32298 578 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 AKAP17AQ02040 695 aaKnown RBP12.56□□□□□ -0.4
CCDC12-204ENST00000460035 FUT2Q10981 343 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 MAF1Q9H063 256 aa12.56□□□□□ -0.4
CCDC12-204ENST00000460035 HTTP42858 3142 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 NFIBO00712 420 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 ST18O60284 1047 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-204ENST00000460035 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 MYCP01106 439 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-204ENST00000460035 CALML3P27482 149 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 BAATQ14032 418 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-204ENST00000460035 CPLX2Q6PUV4 134 aaKnown RBP12.55□□□□□ -0.4
CCDC12-204ENST00000460035 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 NPLOC4Q8TAT6 608 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 SH3TC2Q8TF17 1288 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 APBA2Q99767 749 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
CCDC12-204ENST00000460035 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 PFASO15067 1338 aa12.55□□□□□ -0.4
CCDC12-204ENST00000460035 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 PFKFB2O60825 505 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 NTRK3Q16288 839 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 CCL14Q16627 93 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 ME3Q16798 604 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 ZNF792Q3KQV3 632 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 TRMT44Q8IYL2 757 aaKnown RBP12.54□□□□□ -0.4
CCDC12-204ENST00000460035 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 PXYLP1Q8TE99 480 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 PHKBQ93100 1093 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
CCDC12-204ENST00000460035 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 CFBP00751 764 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 IFNAR1P17181 557 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 UBXN2AP68543 259 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 GHRHRQ02643 423 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 SCRN1Q12765 414 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 TRIB2Q92519 343 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms