RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 ZBED9Q6R2W3 1325 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 DNAJC25-GNG10A0A024R161 153 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 B4GALT4O60513 344 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 APPP05067 770 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 CA3P07451 260 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 ACTN1P12814 892 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 TDO2P48775 406 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 PSMC6P62333 389 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 ZNF444Q8N0Y2 327 aaPredicted RBP9.42□□□□□ -0.9
HPS4-207ENST00000459918 SCLYQ96I15 445 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 TRPV6Q9H1D0 765 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 FEM1BQ9UK73 627 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
HPS4-207ENST00000459918 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
HPS4-207ENST00000459918 SCN5AQ14524 2016 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 NCOR1O75376 2440 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 TANC1Q9C0D5 1861 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.41□□□□□ -0.9
HPS4-207ENST00000459918 ASB14A6NK59 587 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 DYNC1LI2O43237 492 aaPredicted RBP9.41□□□□□ -0.9
HPS4-207ENST00000459918 CD4P01730 458 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 RLBP1P12271 317 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 ALAS1P13196 640 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 RASA1P20936 1047 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 STAT2P52630 851 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 CNTN2Q02246 1040 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 ARNTL2Q8WYA1 636 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
HPS4-207ENST00000459918 RNF146Q9NTX7 359 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
HPS4-207ENST00000459918 KIF28PB7ZC32 967 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 RFXAPO00287 272 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 ATP2A1O14983 1001 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 PRDM1O75626 825 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TTLL1O95922 423 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 CHGBP05060 677 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 PFKMP08237 780 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TSPY3P0CV98 308 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TSPY8P0CW00 308 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 BMP3P12645 472 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 BMP1P13497 986 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 OAZ1P54368 228 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TMEM31Q5JXX7 168 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
HPS4-207ENST00000459918 PANK1Q8TE04 598 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 HAUS7Q99871 368 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
HPS4-207ENST00000459918 SEZ6LQ9BYH1 1024 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
HPS4-207ENST00000459918 PUS7LQ9H0K6 701 aaKnown RBP9.4□□□□□ -0.9
HPS4-207ENST00000459918 WNT8AQ9H1J5 351 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 MTMR7Q9Y216 660 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 NOD1Q9Y239 953 aa9.4□□□□□ -0.9
HPS4-207ENST00000459918 TNKSO95271 1327 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 RAD50Q92878 1312 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 ERC2O15083 957 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 SLC3A2P08195 630 aaKnown RBP9.39□□□□□ -0.91
HPS4-207ENST00000459918 MYL3P08590 195 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 CYP2C9P11712 490 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 SMPD1P17405 629 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 ATP5JP18859 108 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 SLC1A4P43007 532 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 KCNJ6P48051 423 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 BRDTQ58F21 947 aaPredicted RBP9.39□□□□□ -0.91
HPS4-207ENST00000459918 SLFN13Q68D06 897 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 KIAA1211Q6ZU35 1233 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 RETREG2Q8NC44 543 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 HLA-CQ95604 372 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 FGD4Q96M96 766 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 SLC9A7Q96T83 725 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.39□□□□□ -0.91
HPS4-207ENST00000459918 A1CFQ9NQ94 594 aaKnown RBP9.39□□□□□ -0.91
HPS4-207ENST00000459918 TRMT13Q9NUP7 481 aaKnown RBP9.39□□□□□ -0.91
HPS4-207ENST00000459918 COG5Q9UP83 839 aa9.39□□□□□ -0.91
HPS4-207ENST00000459918 ASTN1O14525 1302 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 FAM86C2PA6NEL3 165 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 CTAGE5O15320 804 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 FDX1P10109 184 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 MS4A1P11836 297 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 PTGS1P23219 599 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 CPT1AP50416 773 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
HPS4-207ENST00000459918 PDE4BQ07343 736 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 TTLL4Q14679 1199 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 KRT40Q6A162 431 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 FAM160B2Q86V87 743 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms