RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 B4DLN1 442 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 KDM4AO75164 1064 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 CABYRO75952 493 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 GSPT1P15170 499 aaKnown RBP11.73□□□□□ -0.53
HDLBP-228ENST00000459788 MRPL12P52815 198 aaKnown RBP11.73□□□□□ -0.53
HDLBP-228ENST00000459788 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 IQSEC1Q6DN90 963 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 ANKRD33Q7Z3H0 272 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 PNMA1Q8ND90 353 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 DNERQ8NFT8 737 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
HDLBP-228ENST00000459788 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 HOMER2Q9NSB8 354 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 ZSWIM5Q9P217 1185 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 ZHX1Q9UKY1 873 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-228ENST00000459788 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
HDLBP-228ENST00000459788 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-228ENST00000459788 A0A1W2PQ45 241 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-228ENST00000459788 A0A1W2PQY0 241 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 CHMLP26374 656 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 ACLYP53396 1101 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 TRDNQ13061 729 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 TRAF1Q13077 416 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 ANO1Q5XXA6 986 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-228ENST00000459788 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
HDLBP-228ENST00000459788 TNKSO95271 1327 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
HDLBP-228ENST00000459788 B4E1Z4 1266 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 KIAA0355O15063 1070 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 PGK1P00558 417 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 SYN1P17600 705 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-228ENST00000459788 MUM1L1Q5H9M0 696 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 STARD7Q9NQZ5 370 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
HDLBP-228ENST00000459788 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
HDLBP-228ENST00000459788 ABCB11O95342 1321 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 BAZ2BQ9UIF8 2168 aaKnown RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 NKRFO15226 690 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 SGSM2O43147 1006 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 ZEB2O60315 1214 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 CLTBP09497 229 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 SLC16A2P36021 539 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 TNFAIP2Q03169 654 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 TLE2Q04725 743 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 KCNA10Q16322 511 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 MCF2L2Q86YR7 1114 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 CLEC4DQ8WXI8 215 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
HDLBP-228ENST00000459788 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
HDLBP-228ENST00000459788 ASTN1O14525 1302 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-228ENST00000459788 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-228ENST00000459788 EDNRBP24530 442 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 CDK7P50613 346 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 GHRHRQ02643 423 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-228ENST00000459788 SART3Q15020 963 aaKnown RBP11.69□□□□□ -0.54
HDLBP-228ENST00000459788 SEC23AQ15436 765 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 DUSP28Q4G0W2 176 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-228ENST00000459788 TAPT1Q6NXT6 567 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 FERMT2Q96AC1 680 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 AP5M1Q9H0R1 490 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
HDLBP-228ENST00000459788 MYH7BA7E2Y1 1941 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 ERICH2A1L162 156 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 NFIBO00712 420 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 CTAGE5O15320 804 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 ADCY6O43306 1168 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 ASGR1P07306 291 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 CYP21A2P08686 494 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 RPS6P62753 249 aaKnown RBP11.68□□□□□ -0.54
HDLBP-228ENST00000459788 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-228ENST00000459788 ADGRF4Q8IZF3 695 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms