RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 VAT1LQ9HCJ6 419 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 MYH6P13533 1939 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 MKI67P46013 3256 aaKnown RBP24.17■■□□□ 1.46
VARS-218ENST00000459667 QRICH1Q2TAL8 776 aa24.16■■□□□ 1.46
VARS-218ENST00000459667 TSGA10IPQ3SY00 556 aa24.16■■□□□ 1.46
VARS-218ENST00000459667 NFXL1Q6ZNB6 911 aa24.16■■□□□ 1.46
VARS-218ENST00000459667 PAWRQ96IZ0 340 aaKnown RBP24.16■■□□□ 1.46
VARS-218ENST00000459667 MCM3APO60318 1980 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 CCDC69A6NI79 296 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 KRT32Q14532 448 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 NECAB2Q7Z6G3 386 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 ZNF654Q8IZM8 581 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 TMTC2Q8N394 836 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 NUP133Q8WUM0 1156 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 CLEC4DQ8WXI8 215 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 HTATIP2Q9BUP3 242 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 LRRC2Q9BYS8 371 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 LCTP09848 1927 aa24.15■■□□□ 1.46
VARS-218ENST00000459667 PTPDC1A2A3K4 754 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 SOWAHBA6NEL2 793 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 DDAH1O94760 285 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 SNAI1O95863 264 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 ZNF865P0CJ78 1059 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 HSPA4P34932 840 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 MNX1P50219 401 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 BAATQ14032 418 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 ADCK5Q3MIX3 580 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 ANO1Q5XXA6 986 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 ARMCX2Q7L311 632 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 MYL10Q9BUA6 226 aa24.14■■□□□ 1.45
VARS-218ENST00000459667 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 ZHX1Q9UKY1 873 aaPredicted RBP24.14■■□□□ 1.45
VARS-218ENST00000459667 ABCB11O95342 1321 aa24.13■■□□□ 1.45
VARS-218ENST00000459667 LIFRP42702 1097 aa24.13■■□□□ 1.45
VARS-218ENST00000459667 FBXO11Q86XK2 927 aa24.13■■□□□ 1.45
VARS-218ENST00000459667 CCDC144CPQ8IYA2 1237 aa24.13■■□□□ 1.45
VARS-218ENST00000459667 CTCFLQ8NI51 663 aaPredicted RBP24.13■■□□□ 1.45
VARS-218ENST00000459667 ASB14A6NK59 587 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 AKR1A1P14550 325 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 SLC30A10Q6XR72 485 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 RNF207Q6ZRF8 634 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 KCNB2Q92953 911 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 MAP3K14Q99558 947 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 C11orf49Q9H6J7 331 aa24.12■■□□□ 1.45
VARS-218ENST00000459667 ASTN1O14525 1302 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 ZBTB5O15062 677 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 CALML3P27482 149 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 KIF5BP33176 963 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 SLC35G1Q2M3R5 365 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 DHX32Q7L7V1 743 aaKnown RBP24.11■■□□□ 1.45
VARS-218ENST00000459667 MTMR8Q96EF0 704 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 PURBQ96QR8 312 aaKnown RBP24.11■■□□□ 1.45
VARS-218ENST00000459667 AMNQ9BXJ7 453 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 ABHD16BQ9H3Z7 469 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 RIOX1Q9H6W3 641 aa24.11■■□□□ 1.45
VARS-218ENST00000459667 LRRC37A2A6NM11 1700 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 RARBP10826 455 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 RPS6P62753 249 aaKnown RBP24.1■■□□□ 1.45
VARS-218ENST00000459667 EXOSC10Q01780 885 aaKnown RBP24.1■■□□□ 1.45
VARS-218ENST00000459667 ACVR2BQ13705 512 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 HOMER1Q86YM7 354 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 DPF3Q92784 378 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 TCEANC2Q96MN5 208 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 ADD3Q9UEY8 706 aaKnown RBP24.1■■□□□ 1.45
VARS-218ENST00000459667 SNX14Q9Y5W7 946 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 SLC12A7Q9Y666 1083 aa24.1■■□□□ 1.45
VARS-218ENST00000459667 EPB41L2O43491 1005 aaKnown RBP24.09■■□□□ 1.45
VARS-218ENST00000459667 CYTH3O43739 400 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 HMGB1P09429 215 aaKnown RBP24.09■■□□□ 1.45
VARS-218ENST00000459667 CALM1P0DP23 149 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 CALM2P0DP24 149 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 CALM3P0DP25 149 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 SGMS1Q86VZ5 419 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 PIGSQ96S52 555 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 FAM184BQ9ULE4 1060 aa24.09■■□□□ 1.45
VARS-218ENST00000459667 MRPL11Q9Y3B7 192 aaKnown RBP24.09■■□□□ 1.45
VARS-218ENST00000459667 BAZ2BQ9UIF8 2168 aaKnown RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 DNM1LO00429 736 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 RXRAP19793 462 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 ALDH5A1P51649 535 aaPredicted RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 GJC2Q5T442 439 aaPredicted RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 PRPF38BQ5VTL8 546 aaKnown RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 ARRDC4Q8NCT1 418 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 RGS22Q8NE09 1264 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 LENG1Q96BZ8 264 aaPredicted RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 JAKMIP1Q96N16 626 aaKnown RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 KATNBL1Q9H079 304 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 XPNPEP3Q9NQH7 507 aa24.08■■□□□ 1.45
VARS-218ENST00000459667 DDX49Q9Y6V7 483 aaKnown RBP24.08■■□□□ 1.45
VARS-218ENST00000459667 PPP1R11O60927 126 aaPredicted RBP24.07■■□□□ 1.44
VARS-218ENST00000459667 MYCNP04198 464 aaPredicted RBP24.07■■□□□ 1.44
VARS-218ENST00000459667 COL6A1P12109 1028 aa24.07■■□□□ 1.44
VARS-218ENST00000459667 MCF2L2Q86YR7 1114 aa24.07■■□□□ 1.44
VARS-218ENST00000459667 RAB11FIP4Q86YS3 637 aa24.07■■□□□ 1.44
VARS-218ENST00000459667 MAF1Q9H063 256 aa24.07■■□□□ 1.44
VARS-218ENST00000459667 ALPK3Q96L96 1907 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 KBTBD13C9JR72 458 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 GNAQP50148 359 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 CCDC144BQ3MJ40 725 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 SYNE3Q6ZMZ3 975 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms