RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TROAPQ12815 778 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ICE2Q659A1 982 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ARL6IP4Q66PJ3 421 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 WDR59Q6PJI9 974 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 MB21D1Q8N884 522 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 RNF217Q8TC41 542 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 AFAP1L1Q8TED9 768 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 STAMQ92783 540 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 MMS19Q96T76 1030 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 TAF1P21675 1872 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 ANO9A1A5B4 782 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 EIF3CLB5ME19 914 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 PRDM1O75626 825 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 DDAH1O94760 285 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 PLEKHA8P1O95397 391 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 ATP1A1P05023 1023 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 PARP1P09874 1014 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 YY1P25490 414 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 PRCPP42785 496 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 SSR1P43307 286 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 KRT83P78385 493 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 KCNB1Q14721 858 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 IL17AQ16552 155 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 TMTC3Q6ZXV5 915 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 ADSSL1Q8N142 457 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 RUBCNQ92622 972 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 PURBQ96QR8 312 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 EIF3CQ99613 913 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 TTYH3Q9C0H2 523 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 THAP9Q9H5L6 903 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 ASAP1Q9ULH1 1129 aa9.52□□□□□ -0.89
VPS50-208ENST00000458707 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
VPS50-208ENST00000458707 COBLO75128 1261 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 PHACTR2O75167 634 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CPP00450 1065 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 MYL1P05976 194 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 LONP1P36776 959 aaKnown RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 IFIT1BQ5T764 474 aaKnown RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 ZNF572Q7Z3I7 529 aaPredicted RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 C4orf32Q8N8J7 132 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 PIGBQ92521 554 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 PRDM11Q9NQV5 511 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 HDAC6Q9UBN7 1215 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 MYH7BA7E2Y1 1941 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 MYH4Q9Y623 1939 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 KRT86O43790 486 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CYP19A1P11511 503 aaPredicted RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 TNNT3P45378 269 aaPredicted RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 DNM2P50570 870 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CDK17Q00537 523 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 ITIH3Q06033 890 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 STIM1Q13586 685 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CCDC122Q5T0U0 273 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CCNI2Q6ZMN8 369 aaPredicted RBP9.51□□□□□ -0.89
VPS50-208ENST00000458707 EP400NLQ6ZTU2 488 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 ADGRA1Q86SQ6 560 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CADPS2Q86UW7 1296 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 JAKMIP2Q96AA8 810 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 GDAQ9Y2T3 454 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 KIF13BQ9NQT8 1826 aa9.51□□□□□ -0.89
VPS50-208ENST00000458707 MINDY4BA8MYZ0 360 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 AGPSO00116 658 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 ENC1O14682 589 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 SRGNP10124 158 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 CYLC1P35663 651 aaPredicted RBP9.5□□□□□ -0.89
VPS50-208ENST00000458707 BCAMP50895 628 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 MIGA1Q8NAN2 632 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 NOC3LQ8WTT2 800 aaKnown RBP9.5□□□□□ -0.89
VPS50-208ENST00000458707 SDR42E1Q8WUS8 393 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 PPM1EQ8WY54 764 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 ZBTB9Q96C00 473 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
VPS50-208ENST00000458707 NUP58Q9BVL2 599 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 BRIP1Q9BX63 1249 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 COL4A1P02462 1669 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 BCL9O00512 1426 aa9.5□□□□□ -0.89
VPS50-208ENST00000458707 ZNF804BA4D1E1 1349 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 DOT1LQ8TEK3 1739 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 TRIM49BA6NDI0 452 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 SNAP23O00161 211 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 KLRC4O43908 158 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 RHOBTB3O94955 611 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 SCG2P13521 617 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 CYP7A1P22680 504 aa9.49□□□□□ -0.89
VPS50-208ENST00000458707 GGCXP38435 758 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms