RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 CPLX2Q6PUV4 134 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 POTEAQ6S8J7 498 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 DNAJC14Q6Y2X3 702 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 CATIPQ7Z7H3 387 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SESTD1Q86VW0 696 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 MAP4K3Q8IVH8 894 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PDILTQ8N807 584 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SPC24Q8NBT2 197 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ATL2Q8NHH9 583 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 WDR66Q8TBY9 1149 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 LEO1Q8WVC0 666 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ARHGAP45Q92619 1136 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PPP2R3CQ969Q6 453 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 RBM41Q96IZ5 413 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SPAG5Q96R06 1193 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 MPHOSPH9Q99550 1183 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 TSC22D3Q99576 134 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 TCHPQ9BT92 498 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 FUCA2Q9BTY2 467 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 MMADHCQ9H3L0 296 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SRA1Q9HD15 236 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PAPOLBQ9NRJ5 636 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PAIP2BQ9ULR5 123 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 COG6Q9Y2V7 657 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 CAPN7Q9Y6W3 813 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 DIP2BQ9P265 1576 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 LRRIQ1Q96JM4 1722 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ZCCHC11Q5TAX3 1644 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 ARID3CA6NKF2 412 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 J3QW42 95 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 PRC1O43663 620 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 SASH3O75995 380 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 KRT38O76015 456 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 ECEL1O95672 775 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 MYL1P05976 194 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 GLI2P10070 1586 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 EPB42P16452 691 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 ATP5JP18859 108 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 TRIM21P19474 475 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 EVCP57679 992 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 PABPC4Q13310 644 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 USH1GQ495M9 461 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 TLDC1Q6P9B6 456 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 C16orf87Q6PH81 154 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 KCNV1Q6PIU1 500 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 RSPH3Q86UC2 560 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 LCA5Q86VQ0 697 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 LRRC49Q8IUZ0 686 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 RPAP2Q8IXW5 612 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 GALNT15Q8N3T1 639 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 CNNM3Q8NE01 707 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 LMBR1Q8WVP7 490 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 DYDC1Q8WWB3 177 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 SMARCC1Q92922 1105 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 RBM17Q96I25 401 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 FAM81BQ96LP2 452 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 MYRFLQ96LU7 910 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 JAKMIP1Q96N16 626 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 SCLT1Q96NL6 688 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 TSGA10Q9BZW7 698 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 EXOC1Q9NV70 894 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 LMCD1Q9NZU5 365 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 DDX25Q9UHL0 483 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 ANKRD50Q9ULJ7 1429 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 TPX2Q9ULW0 747 aaKnown RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 TMCO1Q9UM00 188 aa6.29□□□□□ -1.4
HMGB4-202ENST00000458277 PRDM15P57071 1507 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-202ENST00000458277 GOLGA8AA7E2F4 631 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 TPPPO94811 219 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 TROVE2P10155 538 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 ZNF24P17028 368 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 ITGB5P18084 799 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 NAT1P18440 290 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 COPB2P35606 906 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CCT6AP40227 531 aaKnown RBP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 AARSP49588 968 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 NEK2P51955 445 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CCDC15Q0P6D6 951 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 PPFIA1Q13136 1202 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CUL4AQ13619 759 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 WHAMMP3Q1A5X7 153 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CWC27Q6UX04 472 aaKnown RBP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 TTLL7Q6ZT98 887 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 ARMC9Q7Z3E5 817 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 HOMER1Q86YM7 354 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 SMYD1Q8NB12 490 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 CUL5Q93034 780 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms