RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 PRDM1O75626 825 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 CASP1P29466 404 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
SYNE2-207ENST00000458046 PPARAQ07869 468 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 MFSD10Q14728 455 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 CCSAPQ6IQ19 270 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-207ENST00000458046 TMEM139Q8IV31 216 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-207ENST00000458046 ST7Q9NRC1 585 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 BCL9O00512 1426 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 GNAT2P19087 354 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 AFMP43652 599 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 ARMC5Q96C12 935 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 GMLQ99445 158 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
SYNE2-207ENST00000458046 SRPRBQ9Y5M8 271 aaKnown RBP13.26□□□□□ -0.29
SYNE2-207ENST00000458046 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CYP2D7A0A087X1C5 515 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 GPR37L1O60883 481 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
SYNE2-207ENST00000458046 SARSP49591 514 aaKnown RBP13.25□□□□□ -0.29
SYNE2-207ENST00000458046 MORC3Q14149 939 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
SYNE2-207ENST00000458046 TOGARAM2Q6ZUX3 1019 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 TAS1R3Q7RTX0 852 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 MLKLQ8NB16 471 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 DHX58Q96C10 678 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CD248Q9HCU0 757 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 MAFBQ9Y5Q3 323 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-207ENST00000458046 TNKSO95271 1327 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 PHLPP2Q6ZVD8 1323 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 ARHGAP6O43182 974 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 ZSCAN12O43309 604 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 STX17P56962 302 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CHRNDQ07001 517 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-207ENST00000458046 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 TC2NQ8N9U0 490 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 MNS1Q8NEH6 495 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 EPC1Q9H2F5 836 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 ARNT2Q9HBZ2 717 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 CLIC5Q9NZA1 410 aa13.25□□□□□ -0.29
SYNE2-207ENST00000458046 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 TUBB4AP04350 444 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 ZNF18P17022 549 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 CLCN6P51797 869 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 GNG11P61952 73 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 TBX2Q13207 712 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 RNF41Q9H4P4 317 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 PNPLA7Q6ZV29 1317 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 A0A087X0B3 334 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 GNPATO15228 680 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 APBA3O96018 575 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 SLFN14P0C7P3 912 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 GYG1P46976 350 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 CCDC152Q4G0S7 254 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 INO80DQ53TQ3 878 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 NT5DC1Q5TFE4 455 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 DESI2Q9BSY9 194 aa13.24□□□□□ -0.29
SYNE2-207ENST00000458046 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-207ENST00000458046 MYO1BO43795 1136 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 ELOA2Q8IYF1 753 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 WDR24Q96S15 920 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 DACH1Q9UI36 760 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 CEP131Q9UPN4 1083 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 WNT7AO00755 349 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 ENPP3O14638 875 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 TEX33O43247 280 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 COBLO75128 1261 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 KIF20AO95235 890 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 DYNLL1P63167 89 aaKnown RBP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-207ENST00000458046 CHCHD4Q8N4Q1 142 aa13.23□□□□□ -0.29
SYNE2-207ENST00000458046 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms