RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CCDC17Q96LX7 622 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-202ENST00000457422 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 H7C1D1 291 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 SLU7O95391 586 aaKnown RBP18.77■□□□□ 0.6
CCDC43-202ENST00000457422 SLURP2P0DP57 97 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 PLCG1P19174 1290 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 PPFIBP1Q86W92 1011 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 GIMAP8Q8ND71 665 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-202ENST00000457422 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 ZNF215Q9UL58 517 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-202ENST00000457422 SCN9AQ15858 1988 aa18.77■□□□□ 0.6
CCDC43-202ENST00000457422 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.59
CCDC43-202ENST00000457422 HDLBPQ00341 1268 aaKnown RBP18.77■□□□□ 0.59
CCDC43-202ENST00000457422 TCP11X2Q5H9J9 407 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 POTEDQ86YR6 584 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 PDCL2Q8N4E4 241 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 MTMR9Q96QG7 549 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 JMJD4Q9H9V9 463 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 MAPK8IP1Q9UQF2 711 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.59
CCDC43-202ENST00000457422 FECHP22830 423 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 COPB1P53618 953 aaKnown RBP18.76■□□□□ 0.59
CCDC43-202ENST00000457422 RBL2Q08999 1139 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 STRIP1Q5VSL9 837 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 STYK1Q6J9G0 422 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 ADGRF4Q8IZF3 695 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 MTMR8Q96EF0 704 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 CCDC51Q96ER9 411 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 C7orf25Q9BPX7 421 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 GTPBP4Q9BZE4 634 aaKnown RBP18.76■□□□□ 0.59
CCDC43-202ENST00000457422 RIC8AQ9NPQ8 531 aa18.76■□□□□ 0.59
CCDC43-202ENST00000457422 KCNJ18B7U540 433 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 MFAP3LO75121 409 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CCT6AP40227 531 aaKnown RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 FXR2P51116 673 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 STIM1Q13586 685 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 KCNJ12Q14500 433 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CNGA4Q8IV77 575 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 TRIM9Q9C026 710 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.75■□□□□ 0.591e-7■■□□□ 12.3
CCDC43-202ENST00000457422 SLX4Q8IY92 1834 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 TECP42680 631 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CLK2P49760 499 aaKnown RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CACNB3P54284 484 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 NAA30Q147X3 362 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 TOGARAM2Q6ZUX3 1019 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 CCDC94Q9BW85 323 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-202ENST00000457422 IDI2Q9BXS1 227 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
CCDC43-202ENST00000457422 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
CCDC43-202ENST00000457422 N4BP3O15049 544 aa18.74■□□□□ 0.59
CCDC43-202ENST00000457422 EDIL3O43854 480 aa18.74■□□□□ 0.59
CCDC43-202ENST00000457422 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-202ENST00000457422 GYPCP04921 128 aa18.74■□□□□ 0.59
CCDC43-202ENST00000457422 TRIM14Q14142 442 aa18.74■□□□□ 0.59
CCDC43-202ENST00000457422 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-202ENST00000457422 DNAI1Q9UI46 699 aa18.74■□□□□ 0.59
CCDC43-202ENST00000457422 PSMA7O14818 248 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 ECE2O60344 883 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 PPP1R2P41236 205 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 AMPD3Q01432 767 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 CALCRLQ16602 461 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 DACT2Q5SW24 774 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 IRF2BP1Q8IU81 584 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 CCDC47Q96A33 483 aaKnown RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 CALML4Q96GE6 196 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 DHTKD1Q96HY7 919 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 THAP9Q9H5L6 903 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 TAB2Q9NYJ8 693 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 TRIM49BA6NDI0 452 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 H0YIN7 160 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 ZBTB5O15062 677 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 SLC16A2P36021 539 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 TCP10Q12799 353 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 COBLL1Q53SF7 1204 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 PPP4R3AQ6IN85 833 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 KCTD1Q719H9 257 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 MKL1Q969V6 931 aa18.73■□□□□ 0.59
CCDC43-202ENST00000457422 CGNQ9P2M7 1197 aaKnown RBP18.73■□□□□ 0.59
CCDC43-202ENST00000457422 FAM196BA6NMK8 535 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 SLC37A4O43826 429 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TDP2O95551 362 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TPM1P09493 284 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 CASP14P31944 242 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 PDIA5Q14554 519 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 UBE2SQ16763 222 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms