RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 ADORA1P30542 326 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 TXKP42681 527 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 SV2BQ7L1I2 683 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 CPXCR1Q8N123 301 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 FAM71BQ8TC56 605 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 CSRNP1Q96S65 589 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 NAP1L3Q99457 506 aaPredicted RBP10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 KIF2CQ99661 725 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZNRF3Q9ULT6 936 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 ITSN1Q15811 1721 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 B4DLN1 442 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 LMNB1P20700 586 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 MRPL12P52815 198 aaKnown RBP10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 PSMD6Q15008 389 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 WHAMMP3Q1A5X7 153 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 SRGAP1Q7Z6B7 1085 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 NELFBQ8WX92 580 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 TCHPQ9BT92 498 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 EPC1Q9H2F5 836 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 KCNF1Q9H3M0 494 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 MED4Q9NPJ6 270 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 DEXIO95424 95 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 FERP16591 822 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 YY1P25490 414 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 VPS52Q8N1B4 723 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 SSH3Q8TE77 659 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 ASIC3Q9UHC3 531 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 ADAM21Q9UKJ8 722 aa10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
MSC-AS1-201ENST00000457356 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TSNAXIP1Q2TAA8 658 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 SEPT14Q6ZU15 432 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TCP11Q8WWU5 503 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TBC1D7Q9P0N9 293 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 E7EWF7 191 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 BUB1O43683 1085 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TRIM28Q13263 835 aaKnown RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TTC38Q5R3I4 469 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 GKAP1Q5VSY0 366 aaPredicted RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 PPP4R3AQ6IN85 833 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ADAT2Q7Z6V5 191 aaKnown RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 SPTLC3Q9NUV7 552 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 BTBD18B2RXH4 712 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 STX10O60499 249 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 HIP1RO75146 1068 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 TNFAIP3P21580 790 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ARL1P40616 181 aaPredicted RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 IREB2P48200 963 aaKnown RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ARHGEF6Q15052 776 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 RNF40O75150 1001 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ERCC5P28715 1186 aaPredicted RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 RFC1P35251 1148 aaPredicted RBP10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 GPSM2P81274 684 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 DPH6Q7L8W6 267 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 PEX26Q7Z412 305 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 LRRC4BQ9NT99 713 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 VPS54Q9P1Q0 977 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ODF2LQ9ULJ1 636 aa10.76□□□□□ -0.69
MSC-AS1-201ENST00000457356 ABCC4O15439 1325 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CAMTA1Q9Y6Y1 1673 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 PPFIA4O75335 1185 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 GNA11P29992 359 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 IFNAR2P48551 515 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 PLCD1P51178 756 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 INF2Q27J81 1249 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 HERC4Q5GLZ8 1057 aaPredicted RBP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 NELFCDQ8IXH7 590 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 TMEM87BQ96K49 555 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 TSNARE1Q96NA8 513 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 NUP58Q9BVL2 599 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 HACL1Q9UJ83 578 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 A0A087WUV0 522 aaPredicted RBP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCDC151A5D8V7 595 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 USP17L21D6R901 530 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 SEMA3EO15041 775 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 RGS16O15492 202 aaPredicted RBP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 KRT15P19012 456 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CASP14P31944 242 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CUL4AQ13619 759 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 SEL1L2Q5TEA6 688 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 RNF10Q8N5U6 811 aaKnown RBP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 RPGRIP1Q96KN7 1286 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 DPH5Q9H2P9 285 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CNOT7Q9UIV1 285 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms