RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 MAF1Q9H063 256 aa23.78■■□□□ 1.4
FAM3A-217ENST00000457212 HOMER2Q9NSB8 354 aa23.78■■□□□ 1.4
FAM3A-217ENST00000457212 MRPL11Q9Y3B7 192 aaKnown RBP23.78■■□□□ 1.4
FAM3A-217ENST00000457212 V9GY48 417 aaPredicted RBP23.78■■□□□ 1.4
FAM3A-217ENST00000457212 ZSWIM8A7E2V4 1837 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 PRPF3O43395 683 aaKnown RBP23.77■■□□□ 1.4
FAM3A-217ENST00000457212 PPP1R11O60927 126 aaPredicted RBP23.77■■□□□ 1.4
FAM3A-217ENST00000457212 ECM2O94769 699 aaPredicted RBP23.77■■□□□ 1.4
FAM3A-217ENST00000457212 LARGE1O95461 756 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 CAP1Q01518 475 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 AKAP17AQ02040 695 aaKnown RBP23.77■■□□□ 1.4
FAM3A-217ENST00000457212 KCTD2Q14681 263 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 CTU1Q7Z7A3 348 aaKnown RBP23.77■■□□□ 1.4
FAM3A-217ENST00000457212 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 PIBF1Q8WXW3 757 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 SRRDQ9UH36 339 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 TRIM17Q9Y577 477 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 PCDHA1Q9Y5I3 950 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 PLXNB2O15031 1838 aa23.77■■□□□ 1.4
FAM3A-217ENST00000457212 ZNF236Q9UL36 1845 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 GRB14Q14449 540 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 MORN1Q5T089 497 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 OTOP1Q7RTM1 612 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 NECAB1Q8N987 351 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 MMP19Q99542 508 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 NUDT12Q9BQG2 462 aa23.76■■□□□ 1.39
FAM3A-217ENST00000457212 hCG_1984214I3L0E3 225 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
FAM3A-217ENST00000457212 ZNF713Q8N859 430 aaPredicted RBP23.75■■□□□ 1.39
FAM3A-217ENST00000457212 RGS22Q8NE09 1264 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 CLEC4DQ8WXI8 215 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 PHKBQ93100 1093 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 GJD2Q9UKL4 321 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 SMCHD1A6NHR9 2005 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 DOCK3Q8IZD9 2030 aa23.75■■□□□ 1.39
FAM3A-217ENST00000457212 CD2BP2O95400 341 aaKnown RBP23.74■■□□□ 1.39
FAM3A-217ENST00000457212 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
FAM3A-217ENST00000457212 MCF2L2Q86YR7 1114 aa23.74■■□□□ 1.39
FAM3A-217ENST00000457212 ANKRD35Q8N283 1001 aa23.74■■□□□ 1.39
FAM3A-217ENST00000457212 SLC26A6Q9BXS9 759 aa23.74■■□□□ 1.39
FAM3A-217ENST00000457212 PFASO15067 1338 aa23.74■■□□□ 1.39
FAM3A-217ENST00000457212 hCG_1642624A0A1W2PR95 340 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 TAL1P17542 331 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-217ENST00000457212 ADORA2AP29274 412 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 RGS2P41220 211 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 PRKCZQ05513 592 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 MAP2K5Q13163 448 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 IRF5Q13568 498 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 PKN2Q16513 984 aaKnown RBP23.73■■□□□ 1.39
FAM3A-217ENST00000457212 PFKFB3Q16875 520 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-217ENST00000457212 SAMD3Q8N6K7 520 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 USP6NLQ92738 828 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 DDX11Q96FC9 970 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 A1CFQ9NQ94 594 aaKnown RBP23.73■■□□□ 1.39
FAM3A-217ENST00000457212 SLC5A4Q9NY91 659 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 STK36Q9NRP7 1315 aa23.73■■□□□ 1.39
FAM3A-217ENST00000457212 NFIBO00712 420 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 DEXIO95424 95 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 HOXC6P09630 235 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 SCG2P13521 617 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 FLT3LGP49771 235 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 PPP1R18Q6NYC8 613 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 HEATR3Q7Z4Q2 680 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 TMX3Q96JJ7 454 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 LLPHQ9BRT6 129 aaKnown RBP23.72■■□□□ 1.39
FAM3A-217ENST00000457212 MAP3K20Q9NYL2 800 aaKnown RBP23.72■■□□□ 1.39
FAM3A-217ENST00000457212 GABRQQ9UN88 632 aa23.72■■□□□ 1.39
FAM3A-217ENST00000457212 ZNFX1Q9P2E3 1918 aaKnown RBP23.71■■□□□ 1.39
FAM3A-217ENST00000457212 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 XRCC5P13010 732 aaKnown RBP23.71■■□□□ 1.39
FAM3A-217ENST00000457212 GHRHRQ02643 423 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 ST3GAL1Q11201 340 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 PKN1Q16512 942 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 NSMFQ6X4W1 530 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 RNF207Q6ZRF8 634 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 DPP9Q86TI2 863 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 CCDC83Q8IWF9 413 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 BARHL2Q9NY43 387 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 CYP39A1Q9NYL5 469 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 PTPN22Q9Y2R2 807 aa23.71■■□□□ 1.39
FAM3A-217ENST00000457212 RBBP6Q7Z6E9 1792 aaKnown RBP23.7■■□□□ 1.39
FAM3A-217ENST00000457212 DNAJC25-GNG10A0A024R161 153 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 WWC2Q6AWC2 1192 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 TEX2Q8IWB9 1127 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 NSUN7Q8NE18 718 aaKnown RBP23.7■■□□□ 1.38
FAM3A-217ENST00000457212 RAET1EQ8TD07 263 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 SNX21Q969T3 373 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 APBA2Q99767 749 aa23.7■■□□□ 1.38
FAM3A-217ENST00000457212 DIS3Q9Y2L1 958 aaKnown RBP23.7■■□□□ 1.38
FAM3A-217ENST00000457212 TRMT44Q8IYL2 757 aaKnown RBP23.69■■□□□ 1.38
FAM3A-217ENST00000457212 CCDC12Q8WUD4 166 aaPredicted RBP23.69■■□□□ 1.38
FAM3A-217ENST00000457212 WASF1Q92558 559 aa23.69■■□□□ 1.38
FAM3A-217ENST00000457212 GPKOWQ92917 476 aaPredicted RBP eCLIP23.69■■□□□ 1.38
FAM3A-217ENST00000457212 PTPDC1A2A3K4 754 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 POTEB2H3BUK9 544 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 STXBP3O00186 592 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 OPLAHO14841 1288 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 COBLO75128 1261 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 PPFIA3O75145 1194 aa23.68■■□□□ 1.38
FAM3A-217ENST00000457212 CYP2B6P20813 491 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms