RNA–Protein interactions for RNA: ENST00000456713.1

IMP4-206, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-206ENST00000456713 DDX11Q96FC9 970 aa22.54■■□□□ 1.2
IMP4-206ENST00000456713 ALDH8A1Q9H2A2 487 aaPredicted RBP22.54■■□□□ 1.2
IMP4-206ENST00000456713 VAT1LQ9HCJ6 419 aa22.54■■□□□ 1.2
IMP4-206ENST00000456713 A1CFQ9NQ94 594 aaKnown RBP22.54■■□□□ 1.2
IMP4-206ENST00000456713 LCTP09848 1927 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 INHAP05111 366 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 APOBRQ0VD83 1088 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 TRAF1Q13077 416 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 TOB2Q14106 344 aaPredicted RBP22.53■■□□□ 1.2
IMP4-206ENST00000456713 CCL14Q16627 93 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 RTN1Q16799 776 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 MUM1L1Q5H9M0 696 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 FBXO11Q86XK2 927 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 ANKRD35Q8N283 1001 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 CLEC4DQ8WXI8 215 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 AMNQ9BXJ7 453 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 ABCB11O95342 1321 aa22.53■■□□□ 1.2
IMP4-206ENST00000456713 PNMA6FA0A0J9YX94 578 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 PLEKHA8P1O95397 391 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 PGK2P07205 417 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 MAP3K21Q5TCX8 1036 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 ZNF467Q7Z7K2 595 aaPredicted RBP22.52■■□□□ 1.2
IMP4-206ENST00000456713 CCDC144CPQ8IYA2 1237 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 SRBD1Q8N5C6 995 aaKnown RBP22.52■■□□□ 1.2
IMP4-206ENST00000456713 RGS22Q8NE09 1264 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 MAML3Q96JK9 1138 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 PDRG1Q9NUG6 133 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 FLRT1Q9NZU1 646 aa22.52■■□□□ 1.2
IMP4-206ENST00000456713 CCDC196A0A1B0GTZ2 297 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 GOLGA8AA7E2F4 631 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 GOLGA8BA8MQT2 603 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 NFIBO00712 420 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 TAL1P17542 331 aaPredicted RBP22.51■■□□□ 1.19
IMP4-206ENST00000456713 RBM25P49756 843 aaKnown RBP22.51■■□□□ 1.19
IMP4-206ENST00000456713 RAB11FIP4Q86YS3 637 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 MSL3Q8N5Y2 521 aaKnown RBP22.51■■□□□ 1.19
IMP4-206ENST00000456713 FAM133AQ8N9E0 248 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 PIGSQ96S52 555 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 FAM217BQ9NTX9 383 aaPredicted RBP22.51■■□□□ 1.19
IMP4-206ENST00000456713 CYP39A1Q9NYL5 469 aa22.51■■□□□ 1.19
IMP4-206ENST00000456713 BIN2Q9UBW5 565 aaPredicted RBP22.51■■□□□ 1.19
IMP4-206ENST00000456713 PPP1R11O60927 126 aaPredicted RBP22.5■■□□□ 1.19
IMP4-206ENST00000456713 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
IMP4-206ENST00000456713 USH1GQ495M9 461 aa22.5■■□□□ 1.19
IMP4-206ENST00000456713 MFSD14CQ5VZR4 134 aa22.5■■□□□ 1.19
IMP4-206ENST00000456713 HOMER1Q86YM7 354 aa22.5■■□□□ 1.19
IMP4-206ENST00000456713 RRP36Q96EU6 259 aaKnown RBP22.5■■□□□ 1.19
IMP4-206ENST00000456713 MRPL11Q9Y3B7 192 aaKnown RBP22.5■■□□□ 1.19
IMP4-206ENST00000456713 POTEB2H3BUK9 544 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 FUT2Q10981 343 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 MAMDC4Q6UXC1 1216 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 ZNF274Q96GC6 653 aaPredicted RBP22.49■■□□□ 1.19
IMP4-206ENST00000456713 C22orf23Q9BZE7 217 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 CNTNAP5Q8WYK1 1306 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 MCM3APO60318 1980 aa22.49■■□□□ 1.19
IMP4-206ENST00000456713 CCDC85CA6NKD9 419 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 PDIA3P30101 505 aaKnown RBP22.48■■□□□ 1.19
IMP4-206ENST00000456713 CDC27P30260 824 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 GHRHRQ02643 423 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 TRIM32Q13049 653 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 ANKRD1Q15327 319 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 MTFR1Q15390 333 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 NSMFQ6X4W1 530 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 SAMD3Q8N6K7 520 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 FGD4Q96M96 766 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 UPF2Q9HAU5 1272 aaKnown RBP22.48■■□□□ 1.19
IMP4-206ENST00000456713 PCDHA1Q9Y5I3 950 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 RPTORQ8N122 1335 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 SYNGAP1Q96PV0 1343 aa22.48■■□□□ 1.19
IMP4-206ENST00000456713 LOC102724159A0A0B4J2E5 919 aa22.47■■□□□ 1.19
IMP4-206ENST00000456713 CCL5P13501 91 aa22.47■■□□□ 1.19
IMP4-206ENST00000456713 PRKAR2AP13861 404 aaKnown RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 CACNB2Q08289 660 aaPredicted RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 PWP2Q15269 919 aaKnown RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 MCF2L2Q86YR7 1114 aa22.47■■□□□ 1.19
IMP4-206ENST00000456713 CMTR1Q8N1G2 835 aaKnown RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 TINF2Q9BSI4 451 aa22.47■■□□□ 1.19
IMP4-206ENST00000456713 PAK6Q9NQU5 681 aaPredicted RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 SEC63Q9UGP8 760 aaKnown RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 NRBP1Q9UHY1 535 aa22.47■■□□□ 1.19
IMP4-206ENST00000456713 NAP1L2Q9ULW6 460 aaPredicted RBP22.47■■□□□ 1.19
IMP4-206ENST00000456713 BAATQ14032 418 aaPredicted RBP22.46■■□□□ 1.19
IMP4-206ENST00000456713 RNF207Q6ZRF8 634 aa22.46■■□□□ 1.19
IMP4-206ENST00000456713 KIF2CQ99661 725 aa22.46■■□□□ 1.19
IMP4-206ENST00000456713 TMEM106CQ9BVX2 250 aa22.46■■□□□ 1.19
IMP4-206ENST00000456713 UNC93B1Q9H1C4 597 aa22.46■■□□□ 1.19
IMP4-206ENST00000456713 HMX1Q9NP08 348 aaPredicted RBP22.46■■□□□ 1.19
IMP4-206ENST00000456713 MAP3K20Q9NYL2 800 aaKnown RBP22.46■■□□□ 1.19
IMP4-206ENST00000456713 OPLAHO14841 1288 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 GJB1P08034 283 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 CAPN2P17655 700 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 CYP2C19P33261 490 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 ADD1P35611 737 aaKnown RBP22.45■■□□□ 1.18
IMP4-206ENST00000456713 RPS6P62753 249 aaKnown RBP22.45■■□□□ 1.18
IMP4-206ENST00000456713 CNTN2Q02246 1040 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 BACH2Q9BYV9 841 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 RNF208Q9H0X6 261 aa22.45■■□□□ 1.18
IMP4-206ENST00000456713 PTPDC1A2A3K4 754 aa22.44■■□□□ 1.18
IMP4-206ENST00000456713 SOWAHBA6NEL2 793 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms