RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 OR52Z1P0C646 297 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 MUTP22033 750 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 CDC37Q16543 378 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 NBPF9Q3BBW0 867 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 DPY19L2Q6NUT2 758 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 USP50Q70EL3 339 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 SLFN12Q8IYM2 578 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 SCYL3Q8IZE3 742 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 MLKLQ8NB16 471 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 CNNM3Q8NE01 707 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 FTOQ9C0B1 505 aaKnown RBP eCLIP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 GPCPD1Q9NPB8 672 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 RMND1Q9NWS8 449 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 HACL1Q9UJ83 578 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 MRVI1Q9Y6F6 885 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 NEMFO60524 1076 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 GOLGA8HP0CJ92 632 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 MARCKSP29966 332 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 CIITAP33076 1130 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 AMPD3Q01432 767 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 ATP2B2Q01814 1243 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 QRICH1Q2TAL8 776 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 TKFCQ3LXA3 575 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 TYW1BQ6NUM6 668 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 PRPF38AQ8NAV1 312 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 NLGN2Q8NFZ4 835 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 FAM20AQ96MK3 541 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 TMEM39BQ9GZU3 492 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 PCDHA1Q9Y5I3 950 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 FRMPD2Q68DX3 1309 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 WDR90Q96KV7 1748 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 PSDA5PKW4 1024 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 UBE2Q2LH0YL09 131 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 CDC25BP30305 580 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 SARSP49591 514 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 ZNF165P49910 485 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 MDM2Q00987 491 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 RASSF7Q02833 373 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 Q4G0T1 1027 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 XRRA1Q6P2D8 792 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 FOXR2Q6PJQ5 311 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 NIPA1Q7RTP0 329 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 CCDC47Q96A33 483 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 SYT17Q9BSW7 474 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 UBA5Q9GZZ9 404 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 PICK1Q9NRD5 415 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 PRR12Q9ULL5 1215 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 GOLGA6L6A8MZA4 724 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 USP17L10C9JJH3 530 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 TMEM232C9JQI7 657 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 GOLGA6L19H0YKK7 550 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 ACTN4O43707 911 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 PPFIA3O75145 1194 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 ERCC5P28715 1186 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 SREBF1P36956 1147 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 POSTNQ15063 836 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 ZNF174Q15697 407 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 SH3D19Q5HYK7 790 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 CHRDL2Q6WN34 429 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 KCTD1Q719H9 257 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 HOMER1Q86YM7 354 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 IGSF22Q8N9C0 903 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 CRYGNQ8WXF5 182 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 MTMR9Q96QG7 549 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 KDM3AQ9Y4C1 1321 aa7.74□□□□□ -1.17
ECHDC1-210ENST00000454859 LOC285556D6RIA3 1793 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 IQCA1LA6NCM1 817 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 ATP2A1O14983 1001 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 GTPBP6O43824 516 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 GDF11O95390 407 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 ICAM1P05362 532 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 MCM7P33993 719 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 UBA7P41226 1012 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 EARS2Q5JPH6 523 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 TBCKQ8TEA7 893 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 SMARCE1Q969G3 411 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 SLF1Q9BQI6 1058 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 NT5C3AQ9H0P0 336 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 VAT1LQ9HCJ6 419 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 hCG_1642624A0A1W2PR95 340 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 SPDYE3A6NKU9 549 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 POLR2DO15514 142 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 NF2P35240 595 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 COPB2P35606 906 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 PRELPP51888 382 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 BACE1P56817 501 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 RRP1BQ14684 758 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 KCNB1Q14721 858 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms