RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 ASTN1O14525 1302 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 MCM3APO60318 1980 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 NFIBO00712 420 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 SGPL1O95470 568 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-205ENST00000454542 CCND3P30281 292 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-205ENST00000454542 CYP2C19P33261 490 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 RCAN1P53805 252 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 UBE2Q1Q7Z7E8 422 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
HDAC4-205ENST00000454542 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
HDAC4-205ENST00000454542 ABCB11O95342 1321 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-205ENST00000454542 CALM1P0DP23 149 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 CALM2P0DP24 149 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 CALM3P0DP25 149 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 RPS6KB1P23443 525 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 GHRHRQ02643 423 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 TM6SF1Q9BZW5 370 aa16.49■□□□□ 0.23
HDAC4-205ENST00000454542 ZBTB5O15062 677 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 CPA1P15085 419 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 KIF5BP33176 963 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 BLOC1S2Q6QNY1 142 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-205ENST00000454542 NUP133Q8WUM0 1156 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 OGDHLQ9ULD0 1010 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
HDAC4-205ENST00000454542 TNRC18O15417 2968 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-205ENST00000454542 LOC102724159A0A0B4J2E5 919 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 SOWAHBA6NEL2 793 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 PSMA5P28066 241 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 PWP2Q15269 919 aaKnown RBP16.47■□□□□ 0.23
HDAC4-205ENST00000454542 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 LHX8Q68G74 356 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 SLC30A10Q6XR72 485 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
HDAC4-205ENST00000454542 OPLAHO14841 1288 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 SEPT4O43236 478 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 MSCO60682 206 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 SNAI1O95863 264 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 ZNF865P0CJ78 1059 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 RXRAP19793 462 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 GNAQP50148 359 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 ANAPC15P60006 121 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 USH1GQ495M9 461 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 PIGSQ96S52 555 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
HDAC4-205ENST00000454542 DDX20Q9UHI6 824 aaKnown RBP16.46■□□□□ 0.23
HDAC4-205ENST00000454542 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 EVCP57679 992 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 FUT2Q10981 343 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 BAATQ14032 418 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 RNF207Q6ZRF8 634 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 Q6ZUG5 572 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 SRBD1Q8N5C6 995 aaKnown RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 FANCBQ8NB91 859 aa16.45■□□□□ 0.22
HDAC4-205ENST00000454542 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-205ENST00000454542 PNMA6FA0A0J9YX94 578 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 ZBTB43O43298 467 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 EDNRBP24530 442 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-205ENST00000454542 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-205ENST00000454542 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms