RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 STX10O60499 249 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 MED15Q96RN5 788 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 JADE2Q9NQC1 790 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 LRP6O75581 1613 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 MYO1BO43795 1136 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 RCAN1P53805 252 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 CYP27A1Q02318 531 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 ZNF658Q5TYW1 1059 aaPredicted RBP13.4□□□□□ -0.26
SMPD4-213ENST00000454468 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 PSTPIP2Q9H939 334 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 ST7Q9NRC1 585 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 ITGB4P16144 1822 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 EP400Q96L91 3159 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 TRAF5O00463 557 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 MEIS1O00470 390 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 TNNT3P45378 269 aaPredicted RBP13.4□□□□□ -0.26
SMPD4-213ENST00000454468 SYCP1Q15431 976 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 CCDC122Q5T0U0 273 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 CHP1Q99653 195 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 PYM1Q9BRP8 204 aaKnown RBP13.4□□□□□ -0.26
SMPD4-213ENST00000454468 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 AKAP11Q9UKA4 1901 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 ABCC6O95255 1503 aa13.4□□□□□ -0.26
SMPD4-213ENST00000454468 PMS1P54277 932 aaKnown RBP13.4□□□□□ -0.27
SMPD4-213ENST00000454468 PLS1Q14651 629 aa13.4□□□□□ -0.27
SMPD4-213ENST00000454468 PTPROQ16827 1216 aa13.4□□□□□ -0.27
SMPD4-213ENST00000454468 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.27
SMPD4-213ENST00000454468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.4□□□□□ -0.27
SMPD4-213ENST00000454468 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.27
SMPD4-213ENST00000454468 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.27
SMPD4-213ENST00000454468 AKR1B10O60218 316 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 KLK7P49862 253 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 STK4Q13043 487 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 NPY5RQ15761 445 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 TCP11X2Q5H9J9 407 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 SLC35F6Q8N357 371 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 PHACTR2O75167 634 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-213ENST00000454468 NR1I3Q14994 352 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-213ENST00000454468 PRR16Q569H4 304 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 TUBGCP2Q9BSJ2 902 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
SMPD4-213ENST00000454468 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 SLC30A10Q6XR72 485 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 MTRQ99707 1265 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 GLI3P10071 1580 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 RAD17O75943 681 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 TTLL1O95922 423 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.277e-8■■□□□ 11.7
SMPD4-213ENST00000454468 SARSP49591 514 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 SEPT2Q15019 361 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 GOLGA6L9A6NEM1 432 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 ZBTB22O15209 634 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 CFBP00751 764 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 SPA17Q15506 151 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 CNOT6LQ96LI5 555 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
SMPD4-213ENST00000454468 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
SMPD4-213ENST00000454468 H0YIN7 160 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 MFAP3LO75121 409 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 PDHBP11177 359 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
SMPD4-213ENST00000454468 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 STAT3P40763 770 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 AOC3Q16853 763 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 MIGA2Q7L4E1 593 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 CCDC42Q96M95 316 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 RWDD2AQ9UIY3 292 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 ZBTB21Q9ULJ3 1066 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 SPDYE3A6NKU9 549 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 GYPCP04921 128 aa13.37□□□□□ -0.27
SMPD4-213ENST00000454468 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms