RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TNKSO95271 1327 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 RAD50Q92878 1312 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 A0A1W2PQ45 241 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 A0A1W2PQY0 241 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 BAATQ14032 418 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 SNX17Q15036 470 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 ANKS1AQ92625 1134 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 KRT23Q9C075 422 aa19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 PRDM5Q9NQX1 630 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-208ENST00000454134 ASB14A6NK59 587 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 NT5C2P49902 561 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 ACLYP53396 1101 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 KCNA10Q16322 511 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 GPATCH4Q5T3I0 446 aaKnown RBP19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 CLEC4DQ8WXI8 215 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 LRCH3Q96II8 777 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 LBHD1Q9BQE6 289 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 UBAC1Q9BSL1 405 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 CNNM2Q9H8M5 875 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 PRKAG2Q9UGJ0 569 aa19.28■□□□□ 0.68
NCKIPSD-208ENST00000454134 LCTP09848 1927 aa19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 C6orf222P0C671 652 aaPredicted RBP19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 TLE2Q04725 743 aa19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 CYB5R4Q7L1T6 521 aa19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 EEPD1Q7L9B9 569 aa19.27■□□□□ 0.68
NCKIPSD-208ENST00000454134 PTPDC1A2A3K4 754 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 PTGS1P23219 599 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 USH1GQ495M9 461 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 CCSAPQ6IQ19 270 aaPredicted RBP19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 NOL8Q76FK4 1167 aaKnown RBP19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 SH3RF1Q7Z6J0 888 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 FBXO16Q8IX29 292 aaPredicted RBP19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 TSEN34Q9BSV6 310 aaKnown RBP19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 PDLIM7Q9NR12 457 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 PDGFCQ9NRA1 345 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
NCKIPSD-208ENST00000454134 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 SGSM2O43147 1006 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 PQBP1O60828 265 aaKnown RBP19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 CYP21A2P08686 494 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 CALML3P27482 149 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 GJA9P57773 515 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 TNFAIP2Q03169 654 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 C1orf53Q5VUE5 145 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 SPC25Q9HBM1 224 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 STARD7Q9NQZ5 370 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 SZT2Q5T011 3432 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
NCKIPSD-208ENST00000454134 LTBP2Q14767 1821 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 TRIM43BA6NCK2 446 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 MOXD2PA6NHM9 499 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 ALDH5A1P51649 535 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 BEX3Q00994 111 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 SEC23AQ15436 765 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 CDC37Q16543 378 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 GNASQ5JWF2 1037 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 IFIT1BQ5T764 474 aaKnown RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 ADGRF4Q8IZF3 695 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 TRIM43Q96BQ3 446 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-208ENST00000454134 CTAGE5O15320 804 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 ASGR1P07306 291 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 PARP1P09874 1014 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 SMPD1P17405 629 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 RPS6P62753 249 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 TRDNQ13061 729 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 BADQ92934 168 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 PNMA2Q9UL42 364 aa19.23■□□□□ 0.67
NCKIPSD-208ENST00000454134 DHX16O60231 1041 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 TLK2Q86UE8 772 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 STAG2Q8N3U4 1231 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 PCSK9Q8NBP7 692 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 MORC4Q8TE76 937 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 GLT1D1Q96MS3 346 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 GNEQ9Y223 722 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 LAMA3Q16787 3333 aa19.22■□□□□ 0.67
NCKIPSD-208ENST00000454134 E7EWF7 191 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 DYNC1LI2O43237 492 aaPredicted RBP19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 CLTBP09497 229 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 ITGB8P26012 769 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 QRICH1Q2TAL8 776 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 IQSEC1Q6DN90 963 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms