RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 UBA5Q9GZZ9 404 aa20.48■□□□□ 0.87
MECP2-205ENST00000453960 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
MECP2-205ENST00000453960 CRKP46108 304 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 ADKP55263 362 aaKnown RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 DOK7Q18PE1 504 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 LETM2Q2VYF4 491 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 KMT5BQ4FZB7 885 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 TCP11X2Q5H9J9 407 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 STRIP1Q5VSL9 837 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 SYT10Q6XYQ8 523 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 IRF2BP1Q8IU81 584 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 JMJD4Q9H9V9 463 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 GDAQ9Y2T3 454 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 CCNT1O60563 726 aaKnown RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 SLU7O95391 586 aaKnown RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 HLA-DOAP06340 250 aa20.47■□□□□ 0.87
MECP2-205ENST00000453960 COPB1P53618 953 aaKnown RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
MECP2-205ENST00000453960 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
MECP2-205ENST00000453960 FANCGO15287 622 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 MFAP3LO75121 409 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 PLCG1P19174 1290 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 ADCY7P51828 1080 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 DACT2Q5SW24 774 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 TRIM9Q9C026 710 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 DHX36Q9H2U1 1008 aaKnown RBP20.46■□□□□ 0.87
MECP2-205ENST00000453960 DNAJC18Q9H819 358 aa20.46■□□□□ 0.87
MECP2-205ENST00000453960 COL2A1P02458 1487 aaPredicted RBP20.46■□□□□ 0.87
MECP2-205ENST00000453960 FRMPD2Q68DX3 1309 aaPredicted RBP20.46■□□□□ 0.87
MECP2-205ENST00000453960 HOXA7P31268 230 aaPredicted RBP20.45■□□□□ 0.86
MECP2-205ENST00000453960 PPP1R2P41236 205 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 RBL2Q08999 1139 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 NFIAQ12857 509 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 PDIA5Q14554 519 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 PPP4R3AQ6IN85 833 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 CNNM4Q6P4Q7 775 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 DHTKD1Q96HY7 919 aaPredicted RBP20.45■□□□□ 0.86
MECP2-205ENST00000453960 CCDC94Q9BW85 323 aaPredicted RBP20.45■□□□□ 0.86
MECP2-205ENST00000453960 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 VAT1LQ9HCJ6 419 aa20.45■□□□□ 0.86
MECP2-205ENST00000453960 PPP1R11O60927 126 aaPredicted RBP20.44■□□□□ 0.86
MECP2-205ENST00000453960 GYPCP04921 128 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 SCNN1DP51172 638 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 TRIM14Q14142 442 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 TTI2Q6NXR4 508 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 CNGA4Q8IV77 575 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 PDCL2Q8N4E4 241 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 NOC3LQ8WTT2 800 aaKnown RBP20.44■□□□□ 0.86
MECP2-205ENST00000453960 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
MECP2-205ENST00000453960 BIN2Q9UBW5 565 aaPredicted RBP20.44■□□□□ 0.86
MECP2-205ENST00000453960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.44■□□□□ 0.862e-7■■■□□ 15.8
MECP2-205ENST00000453960 KCNJ18B7U540 433 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 EEF1GP26641 437 aaKnown RBP20.44■□□□□ 0.86
MECP2-205ENST00000453960 KCNJ12Q14500 433 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 TOGARAM2Q6ZUX3 1019 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 PPFIBP1Q86W92 1011 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 TMEM260Q9NX78 707 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 STK17AQ9UEE5 414 aa20.44■□□□□ 0.86
MECP2-205ENST00000453960 APBA3O96018 575 aa20.43■□□□□ 0.86
MECP2-205ENST00000453960 TATDN1Q6P1N9 297 aa20.43■□□□□ 0.86
MECP2-205ENST00000453960 ANKRD20A12PQ8NF67 263 aa20.43■□□□□ 0.86
MECP2-205ENST00000453960 COA7Q96BR5 231 aa20.43■□□□□ 0.86
MECP2-205ENST00000453960 A0A1W2PQC6 194 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 ZBTB5O15062 677 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 STIM1Q13586 685 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 CLEC10AQ8IUN9 316 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 ZNF507Q8TCN5 953 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 SRRTQ9BXP5 876 aaKnown RBP20.42■□□□□ 0.86
MECP2-205ENST00000453960 CGNQ9P2M7 1197 aaKnown RBP20.42■□□□□ 0.86
MECP2-205ENST00000453960 FAM198AQ9UFP1 575 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 ATF5Q9Y2D1 282 aaPredicted RBP20.42■□□□□ 0.86
MECP2-205ENST00000453960 ATRNL1Q5VV63 1379 aa20.42■□□□□ 0.86
MECP2-205ENST00000453960 PSMA7O14818 248 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 N4BP3O15049 544 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 PMS1P54277 932 aaKnown RBP20.41■□□□□ 0.86
MECP2-205ENST00000453960 AMPD3Q01432 767 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 GRB10Q13322 594 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 ZFPM1Q8IX07 1006 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 GLT8D2Q9H1C3 349 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 SERPINA10Q9UK55 444 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 ADGRG1Q9Y653 693 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 CCNE1P24864 410 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 TECP42680 631 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 FXR1P51114 621 aaKnown RBP eCLIP20.41■□□□□ 0.86
MECP2-205ENST00000453960 NAA30Q147X3 362 aaPredicted RBP20.41■□□□□ 0.86
MECP2-205ENST00000453960 CALCRLQ16602 461 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 FOXR2Q6PJQ5 311 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
MECP2-205ENST00000453960 PNMA5Q96PV4 448 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms