RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 UBA5Q9GZZ9 404 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 FOXP1Q9H334 677 aaPredicted RBP9.66□□□□□ -0.86
LMO3-210ENST00000453727 RTEL1Q9NZ71 1219 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 PITPNM2Q9BZ72 1349 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 IQCA1LA6NCM1 817 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 CALRP27797 417 aaKnown RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 CAP2P40123 477 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 ZNF543Q08ER8 600 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 NPY5RQ15761 445 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 NBPF20Q3BBV1 942 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 USP50Q70EL3 339 aaPredicted RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 FAM200AQ8TCP9 573 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 PGBD1Q96JS3 809 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 GPCPD1Q9NPB8 672 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 PHF20L1A8MW92 1017 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 KIF2AO00139 706 aaPredicted RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 ERCC6LQ2NKX8 1250 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 ASPRV1Q53RT3 343 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 MCTP2Q6DN12 878 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.65□□□□□ -0.86
LMO3-210ENST00000453727 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 VAT1LQ9HCJ6 419 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 ZBTB21Q9ULJ3 1066 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 PPP2R3BQ9Y5P8 575 aa9.65□□□□□ -0.86
LMO3-210ENST00000453727 POTECB2RU33 542 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ADAMTS3O15072 1205 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ATP8B1O43520 1251 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 RAD21O60216 631 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 SMARCA1P28370 1054 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 KRT2P35908 639 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 LMAN1P49257 510 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 EAPPQ56P03 285 aaPredicted RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 ANO1Q5XXA6 986 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 DCAF15Q66K64 600 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 TTBK2Q6IQ55 1244 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 DLK2Q6UY11 383 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 SUGP1Q8IWZ8 645 aaKnown RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 LINC00301Q8NCQ3 95 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 HOOK2Q96ED9 719 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 PIGSQ96S52 555 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 FUCA2Q9BTY2 467 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 TAF1DQ9H5J8 278 aaPredicted RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 FZD1Q9UP38 647 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 SCN4AP35499 1836 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ATAD5Q96QE3 1844 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 A0A1W2PRG0 241 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 DCAF8L1A6NGE4 600 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 NEMFO60524 1076 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ASNSP08243 561 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ACTN2P35609 894 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 NLRP5P59047 1200 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 CCDC96Q2M329 555 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ARHGAP29Q52LW3 1261 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 EARS2Q5JPH6 523 aaKnown RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 SLFN13Q68D06 897 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 HEATR3Q7Z4Q2 680 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
LMO3-210ENST00000453727 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 NRBP1Q9UHY1 535 aa9.64□□□□□ -0.87
LMO3-210ENST00000453727 GOLGA6L4A6NEF3 574 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 ADM5C9JUS6 153 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 F5H6K3 240 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 STXBP3O00186 592 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 YEATS4O95619 227 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 OAS2P29728 719 aaKnown RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 ECE1P42892 770 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 TOB1P50616 345 aaPredicted RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 KLRC3Q07444 240 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 STK38Q15208 465 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 SF3A1Q15459 793 aaKnown RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 SUPT20HL1Q3ZLR7 823 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 PNMA8AQ86V59 439 aaPredicted RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 TNFRSF25Q93038 417 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 EXOC4Q96A65 974 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 LIG1P18858 919 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 INPP5BP32019 993 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 SLC16A2P36021 539 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 SLC1A4P43007 532 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 GPATCH4Q5T3I0 446 aaKnown RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 LRCH2Q5VUJ6 765 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 ADGRF4Q8IZF3 695 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 IQUBQ8NA54 791 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 GMCL1P1Q8NEA9 526 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 ACER1Q8TDN7 264 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms