RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CATSPERGQ6ZRH7 1159 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ERO1BQ86YB8 467 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 REPS2Q8NFH8 660 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ENGASEQ8NFI3 743 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 BICD2Q8TD16 824 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 TBC1D5Q92609 795 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 SLF1Q9BQI6 1058 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 GOLPH3LQ9H4A5 285 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 RPAP3Q9H6T3 665 aaPredicted RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 PSTPIP2Q9H939 334 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ELP3Q9H9T3 547 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 SLC38A10Q9HBR0 1119 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 FBXO2Q9UK22 296 aaPredicted RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 PPP1R9AQ9ULJ8 1098 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 NOL7Q9UMY1 257 aaKnown RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ADAMTS5Q9UNA0 930 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 CSADQ9Y600 493 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 MRVI1Q9Y6F6 885 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 PLXNA1Q9UIW2 1896 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CCDC194A0A1B0GVG4 234 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 UNCXA6NJT0 531 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 PIK3CDO00329 1044 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CXCL11O14625 94 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 IRF6O14896 467 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CUTAO60888 179 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 NR1I2O75469 434 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ITGBL1O95965 494 aaPredicted RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ICAM1P05362 532 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CMA1P23946 247 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 DSG3P32926 999 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 GJA5P36382 358 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ME1P48163 572 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ATP2C1P98194 919 aaPredicted RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 PTGDRQ13258 359 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 MOGSQ13724 837 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 NONOQ15233 471 aaKnown RBP eCLIP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 IL17AQ16552 155 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USH1GQ495M9 461 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 TPRNQ4KMQ1 711 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CCDC174Q6PII3 467 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 USP17L6PQ6QN14 398 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 SHC4Q6S5L8 630 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 POTEEQ6S8J3 1075 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ARMC9Q7Z3E5 817 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CCAR1Q8IX12 1150 aaKnown RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 RBM46Q8TBY0 533 aaKnown RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 TBCKQ8TEA7 893 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CRYGNQ8WXF5 182 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CUL5Q93034 780 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CLIC6Q96NY7 704 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 GZF1Q9H116 711 aaPredicted RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 GLT8D2Q9H1C3 349 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 CEP131Q9UPN4 1083 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 KCNH4Q9UQ05 1017 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 HPSEQ9Y251 543 aa6.85□□□□□ -1.31
SDC4P-201ENST00000453285 SRPRBQ9Y5M8 271 aaKnown RBP6.85□□□□□ -1.31
SDC4P-201ENST00000453285 ABCB11O95342 1321 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 A0A0G2JLL6 359 aaPredicted RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 A0A1B0GVL5 298 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 DCAF8L1A6NGE4 600 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 VWA5AO00534 786 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 FLOT1O75955 427 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 BMP15O95972 392 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 FDX1P10109 184 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 MCM7P33993 719 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 ZNF445P59923 1031 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 GHRHRQ02643 423 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TRAF1Q13077 416 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 PPIL2Q13356 520 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TTLL12Q14166 644 aaPredicted RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 COG2Q14746 738 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 ZSCAN23Q3MJ62 389 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TREML2Q5T2D2 321 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 RESP18Q5W5W9 173 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 PRRT2Q7Z6L0 340 aaPredicted RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 NEK8Q86SG6 692 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 FMR1NBQ8N0W7 255 aaPredicted RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 JMYQ8N9B5 988 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 KRI1Q8N9T8 703 aaKnown RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 FSIP1Q8NA03 581 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 ZNF579Q8NAF0 562 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms